RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-215	ENST00000522275	CSNK1G2	P78368	415 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	DLK1	P80370	383 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	DGCR2	P98153	550 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SLC25A11	Q02978	314 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ZNF763	Q0D2J5	394 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	OR2F1	Q13607	317 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	RAB31	Q13636	194 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ZNF345	Q14585	488 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ATP6AP1L	Q52LC2	224 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	DCAF15	Q66K64	600 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PSAPL1	Q6NUJ1	521 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	STEAP1B	Q6NZ63	245 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PAQR6	Q6TCH4	344 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275		Q6ZVH6	145 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PID1	Q7Z2X4	250 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	LAPTM4B	Q86VI4	370 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	TMEM183A	Q8IXX5	376 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	METTL27	Q8N6F8	245 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	MRPL43	Q8N983	215 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	COLGALT1	Q8NBJ5	622 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	OR9A4	Q8NGU2	314 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	OR51Q1	Q8NH59	317 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	RHBDD1	Q8TEB9	315 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	TMEM239	Q8WW34	195 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ASB5	Q8WWX0	329 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	MCHR2	Q969V1	340 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	TMEM45B	Q96B21	275 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	FAM46A	Q96IP4	442 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SLC41A2	Q96JW4	573 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	IL17F	Q96PD4	163 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PGLYRP2	Q96PD5	576 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	OR2V2	Q96R30	315 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	LPAR4	Q99677	370 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ARHGAP9	Q9BRR9	750 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	RAB33B	Q9H082	229 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	CENPM	Q9NSP4	180 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	GPATCH2L	Q9NWQ4	482 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	MARCH5	Q9NX47	278 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PLEK2	Q9NYT0	353 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	AHSP	Q9NZD4	102 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	STEAP1	Q9UHE8	339 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	MSRA	Q9UJ68	235 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SF3B6	Q9Y3B4	125 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	HDGFL3	Q9Y3E1	203 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	TNFRSF18	Q9Y5U5	241 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SNX11	Q9Y5W9	270 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275		A0A087X1B8	175 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	TRAV14DV4	A0A0A6YYC5	116 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	GJE1	A6NN92	205 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SLC16A5	O15375	505 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	CLDN11	O75508	207 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	LEFTY1	O75610	366 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	GLS	O94925	669 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	CTSB	P07858	339 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	FCGR3A	P08637	254 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	CXCL1	P09341	107 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	LINC00032	P0C843	101 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	FAM157C	P0CG43	387 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PIP	P12273	146 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	GOT1	P17174	413 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SDC1	P18827	310 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	FGF9	P31371	208 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	CNR2	P34972	360 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PXN	P49023	591 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	MMP15	P51511	669 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	DVL1P1	P54792	670 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	BID	P55957	195 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	CDC42EP1	Q00587	391 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	BDH1	Q02338	343 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	HYAL1	Q12794	435 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	KLF9	Q13886	244 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ZNF234	Q14588	700 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ZNF460	Q14592	562 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	MMD	Q15546	238 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PSG3	Q16557	428 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SLC35G1	Q2M3R5	365 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	TMEM249	Q2WGJ8	235 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	C4orf17	Q53FE4	359 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	LRRC73	Q5JTD7	316 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	REEP3	Q6NUK4	255 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SLC27A1	Q6PCB7	646 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	NCEH1	Q6PIU2	408 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	CTU1	Q7Z7A3	348 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	PIM3	Q86V86	326 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	FBXO16	Q8IX29	292 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	TMEM130	Q8N3G9	435 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SAMD12	Q8N8I0	201 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	LINC00116	Q8NCU8	138 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	OR1K1	Q8NGR3	316 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	HAVCR2	Q8TDQ0	301 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	HMGB4	Q8WW32	186 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	RGP1	Q92546	391 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	RGMA	Q96B86	450 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	LOXL4	Q96JB6	756 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	HHIPL1	Q96JK4	782 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	JSRP1	Q96MG2	331 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	ZFP3	Q96NJ6	502 aa		4.24	□□□□□ -1.73
PCM1-215	ENST00000522275	SLC46A1	Q96NT5	459 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms