RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 NPIPB7O75200 414 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 CD55P08174 381 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 CD28P10747 220 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 PRG2P13727 222 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 NQO1P15559 274 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 GRPRP30550 384 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 CSNK1A1P48729 337 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 EFNB2P52799 333 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 COPZ1P61923 177 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 HSF2Q03933 536 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 PLP2Q04941 152 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 PTGR1Q14914 329 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 SYPL1Q16563 259 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 XKR7Q5GH72 579 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 FAM201AQ5SY85 155 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 AP1ARQ63HQ0 302 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 WBP2NLQ6ICG8 309 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 LYPD2Q6UXB3 125 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 RNF144BQ7Z419 303 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 SNX32Q86XE0 403 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 ZNF101Q8IZC7 436 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 RBM15BQ8NDT2 890 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 OR4F17Q8NGA8 305 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 OR4A15Q8NGL6 344 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 KLF14Q8TD94 323 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 METTL2AQ96IZ6 378 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 OR4F4Q96R69 305 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 PAFAH2Q99487 392 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 TMEM246Q9BRR3 403 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 C1orf50Q9BV19 199 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 DUSP26Q9BV47 211 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 TCF7L2Q9NQB0 619 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 CYSLTR2Q9NS75 346 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 CLN8Q9UBY8 286 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 VPREB3Q9UKI3 123 aa9.13□□□□□ -0.95
CTNNA1-234ENST00000522227 A0A1W2PRD5 423 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 A0A1W2PRF3 423 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 A0A1W2PRM7 423 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 E9PQ18 207 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 MS4A18H0YCH9 400 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 LSM1O15116 133 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 ENSAO43768 121 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 FBXO24O75426 580 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 CPSF4O95639 269 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 SNAP29O95721 258 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 PTHP01270 115 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 C1QCP02747 245 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 ADH4P08319 380 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 TCP1P17987 556 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 TNFRSF1AP19438 455 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 TNFSF4P23510 183 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 SLC6A2P23975 617 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 CRHR1P34998 444 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 RPL3P39023 403 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 WNT5AP41221 380 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 ACAA2P42765 397 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 PRB3Q04118 309 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 EMX1Q04741 257 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 EGR4Q05215 589 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 MS4A18Q3C1V0 323 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 CFAP157Q5JU67 520 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 COX20Q5RI15 118 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 WDR25Q64LD2 544 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 H1FNTQ75WM6 255 aaPredicted RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 SLC16A14Q7RTX9 510 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 VRK2Q86Y07 508 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 CREG2Q8IUH2 290 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 LRRC18Q8N456 261 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 HIPK4Q8NE63 616 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 OR4K5Q8NGD3 323 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 ABHD4Q8TB40 342 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 STK35Q8TDR2 534 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 TAAR8Q969N4 342 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 RBMXL1Q96E39 390 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 LRR1Q96L50 414 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 SAMD8Q96LT4 415 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 TECTBQ96PL2 329 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 MECRQ9BV79 373 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 SLC19A3Q9BZV2 496 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 C1orf198Q9H425 327 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 TUBB1Q9H4B7 451 aa9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 EIF3KQ9UBQ5 218 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-234ENST00000522227 C5orf49A4QMS7 147 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 TMEM114B3SHH9 223 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 ZNF879B4DU55 563 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 RAD51CO43502 376 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 PEX11AO75192 247 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 FARS2O95363 451 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 AGR2O95994 175 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 NEFHP12036 1026 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 MMP9P14780 707 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 CDC25BP30305 580 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 PHBP35232 272 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 SERPINB9P50453 376 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 MMP16P51512 607 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 HOXC5Q00444 222 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 GNA13Q14344 377 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 MTX3Q5HYI7 312 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 OR4F3Q6IEY1 312 aa9.11□□□□□ -0.95
CTNNA1-234ENST00000522227 ZDHHC24Q6UX98 284 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms