RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 CDAP32320 146 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 TEKQ02763 1124 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 TLE1Q04724 770 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 ZNF91Q05481 1191 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 PIGFQ07326 219 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 LINC01590Q5TEZ4 76 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 SHFQ7M4L6 423 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 BTLAQ7Z6A9 289 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 ZBTB46Q86UZ6 589 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 GID4Q8IVV7 300 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 SMAP2Q8WU79 429 aaPredicted RBP11.82□□□□□ -0.52
CLK4-210ENST00000522136 ULBP2Q9BZM5 246 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 PAK1IP1Q9NWT1 392 aaPredicted RBP11.82□□□□□ -0.52
CLK4-210ENST00000522136 EMC9Q9Y3B6 208 aa11.82□□□□□ -0.52
CLK4-210ENST00000522136 SH3D21A4FU49 640 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 KALRNO60229 2985 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 RPSAP08865 295 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 CRHBPP24387 322 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 CRABP1P29762 137 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 CA7P43166 264 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 CHN2P52757 468 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 FOXG1P55316 489 aaPredicted RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 SOWAHCQ53LP3 525 aaPredicted RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 UBE2J2Q8N2K1 259 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 GPR137CQ8N3F9 429 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 GGHQ92820 318 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 RFKQ969G6 155 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 RNFT2Q96EX2 444 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 RBM24Q9BX46 236 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 CRLF2Q9HC73 371 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 PLCXD1Q9NUJ7 323 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 A0A0G2JNJ9 132 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 EIF4E1BA6NMX2 242 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 CENPBD1B2RD01 187 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 DHHO43323 396 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 KHDRBS3O75525 346 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 KRT33AO76009 404 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 GLCEO94923 617 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 SCG5P05408 212 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 STSP08842 583 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 ADRA2AP08913 450 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 MRPL3P09001 348 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 OR3A2P47893 321 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 MTNR1AP48039 350 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 CASP6P55212 293 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 CXCR4P61073 352 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 ROR2Q01974 943 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 MVKQ03426 396 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 MEP1BQ16820 701 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 RBM48Q5RL73 367 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 C9orf135Q5VTT2 229 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 OR51G2Q8NGK0 314 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 DMRTA2Q96SC8 542 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 Q9UFV3 132 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 PSORS1C1Q9UIG5 152 aa11.81□□□□□ -0.52
CLK4-210ENST00000522136 RALYQ9UKM9 306 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLK4-210ENST00000522136 RPL36Q9Y3U8 105 aaKnown RBP11.81□□□□□ -0.52
CLK4-210ENST00000522136 A0A1W2PPL8 197 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 SLC22A31A6NKX4 558 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 B8ZZF3 427 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 E9PLN8 166 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 SELENOFO60613 162 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 C1QL1O75973 258 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 SEC14L2O76054 403 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 HLA-DQA2P01906 255 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 CCDC159P0C7I6 412 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 SLC15A1P46059 708 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 CDH15P55291 814 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 FAPQ12884 760 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 EIF2S3LQ2VIR3 472 aaKnown RBP11.8□□□□□ -0.52
CLK4-210ENST00000522136 CEACAM16Q2WEN9 425 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 SLC35D3Q5M8T2 416 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 TFAP2EQ6VUC0 442 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 AHSA2Q719I0 299 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 ZNF843Q8N446 348 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 ZNF540Q8NDQ6 660 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 OR4F15Q8NGB8 312 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 FNDC8Q8TC99 324 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 LGALS12Q96DT0 336 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 VKORC1Q9BQB6 163 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 LINC00470Q9BZP3 86 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 RACGAP1Q9H0H5 632 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 SEC61A2Q9H9S3 476 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 GPR35Q9HC97 309 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 SCN3BQ9NY72 215 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 UPB1Q9UBR1 384 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 WARS2Q9UGM6 360 aaKnown RBP11.8□□□□□ -0.52
CLK4-210ENST00000522136 MOKQ9UQ07 419 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 MYRFQ9Y2G1 1151 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 MEMO1Q9Y316 297 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 UGT2A1Q9Y4X1 527 aa11.8□□□□□ -0.52
CLK4-210ENST00000522136 KMT2BQ9UMN6 2715 aaPredicted RBP11.8□□□□□ -0.52
CLK4-210ENST00000522136 CCL21O00585 134 aa11.79□□□□□ -0.52
CLK4-210ENST00000522136 TFP02787 698 aa11.79□□□□□ -0.52
CLK4-210ENST00000522136 NAA10P41227 235 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms