RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ATP1B1P05026 303 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ADORA3P0DMS8 318 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 S1PR1P21453 382 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 RPS4Y1P22090 263 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 GADD45AP24522 165 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 OMPP47874 163 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 GIPRP48546 466 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 BMXP51813 675 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 GFRA1P56159 465 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 CLDN15P56746 228 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 RGS8P57771 180 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 NCS1P62166 190 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 IL13RA1P78552 427 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 EFNB1P98172 346 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ST3GAL3Q11203 375 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 MAP4K2Q12851 820 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 COX10Q12887 443 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 GPR68Q15743 365 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 TAB1Q15750 504 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 DECR1Q16698 335 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 TIGD6Q17RP2 521 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 SLC46A3Q7Z3Q1 461 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ZAR1Q86SH2 424 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 PEX5LQ8IYB4 626 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF619Q8N2I2 560 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 SLC15A4Q8N697 577 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 OR8D4Q8NGM9 314 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 DYNC2LI1Q8TCX1 351 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF675Q8TD23 568 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 PIK3R3Q92569 461 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 S100PBPQ96BU1 408 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 LGALS12Q96DT0 336 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 DTNBP1Q96EV8 351 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 C1orf147Q96MC9 270 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 OR5M11Q96RB7 305 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 CITED1Q99966 193 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 TSSK6Q9BXA6 273 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 CDCA4Q9BXL8 241 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ITPAQ9BY32 194 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 SAP130Q9H0E3 1048 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 EGLN3Q9H6Z9 239 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 PLSCR4Q9NRQ2 329 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 CNOT2Q9NZN8 540 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 KCNE5Q9UJ90 142 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 SLC13A4Q9UKG4 626 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 PROCRQ9UNN8 238 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF232Q9UNY5 417 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 IFT52Q9Y366 437 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 CORINQ9Y5Q5 1042 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 SPACA6W5XKT8 324 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 FRAS1Q86XX4 4008 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 AGAP5A6NIR3 686 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 EFCAB9A8MZ26 197 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 J3QRK9 145 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 M0R3G1 203 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 AP3D1O14617 1153 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 SLC22A1O15245 554 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 AIREO43918 545 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 NKX2-2O95096 273 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 OR5F1O95221 314 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 TACSTD2P09758 323 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 IFI6P09912 130 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 FBXO45P0C2W1 286 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 SLC35E2P0CK97 266 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 PIPP12273 146 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 PRG2P13727 222 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF708P17019 499 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 GSTM3P21266 225 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 GABRA3P34903 492 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 OPRL1P41146 370 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 GAS1P54826 345 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 CDH11P55287 796 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 POU6F2P78424 691 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 TSPAN31Q12999 210 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 LARS2Q15031 903 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 TSC22D1Q15714 1073 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 FAM189A2Q15884 450 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF829Q3KNS6 432 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 ARMCX4Q5H9R4 360 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 DCST2Q5T1A1 773 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 SAMD5Q5TGI4 173 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 RUSC1-AS1Q66K80 236 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 OR2A2Q6IF42 318 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 ZCCHC12Q6PEW1 402 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 FIGNL1Q6PIW4 674 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 CASP12Q6UXS9 341 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF730Q6ZMV8 503 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF367Q7RTV3 350 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 CDRT4Q8N9R6 151 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 OR4Q3Q8NH05 313 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 TRUB1Q8WWH5 349 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 WFDC12Q8WWY7 111 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 ACOT11Q8WXI4 607 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 HOXB13Q92826 284 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 BORCS5Q969J3 196 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 SLC41A3Q96GZ6 507 aa6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 SH3YL1Q96HL8 342 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-227ENST00000521387 FAM46AQ96IP4 442 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms