RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 OR2G2Q8NGZ5 317 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 LILRB1Q8NHL6 650 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 STOML3Q8TAV4 291 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 FGF13Q92913 245 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 C3orf49Q96BT1 292 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 CNTNAP3BQ96NU0 1288 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 ELOVL3Q9HB03 270 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 Q9N2J8 555 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 EXOSC3Q9NQT5 275 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 ZNF629Q9UEG4 869 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 NDRG3Q9UGV2 375 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 KLHDC2Q9Y2U9 406 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM235A6NFC5 223 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 OR2W5A6NFC9 320 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 PEBP1P30086 187 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 PDZK1IP1Q13113 114 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 CST6Q15828 149 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC36A1Q7Z2H8 476 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 SPACA7Q96KW9 195 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 GAREM1Q9H706 876 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 CYB5R1Q9UHQ9 305 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 MRM2Q9UI43 246 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 RTTNQ86VV8 2226 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 OR6C65A6NJZ3 312 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 ADAM11O75078 769 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 FGF19O95750 216 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 APOC1P02654 83 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 MPGP29372 298 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 TSFMP43897 325 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 KCNJ3P48549 501 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 DHRS2Q13268 280 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 RBM39Q14498 530 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 LILRA6Q6PI73 481 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 USP53Q70EK8 1073 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 OOSP2Q86WS3 158 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 GALNT16Q8N428 558 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 TSACCQ96A04 125 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC22A18Q96BI1 424 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 SERGEFQ9UGK8 458 aa11.67□□□□□ -0.54
TRAPPC9-208ENST00000520857 PRR32B1ATL7 298 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ZNF208O43345 1280 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 RAB13P51153 203 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 PRPS1P60891 318 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ERV3-1Q14264 604 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 UNQ9370/PRO34162Q6UXP9 181 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 NANPQ8TBE9 248 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 WDR76Q9H967 626 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ZNF106Q9H2Y7 1883 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 KIAA1671Q9BY89 1806 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 CTSVO60911 334 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ALOX12BO75342 701 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 MOSPD3O75425 235 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 EFEMP2O95967 443 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 GP1BAP07359 652 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 C11orf87Q6NUJ2 197 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ANKRD16Q6P6B7 361 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC16A9Q7RTY1 509 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 PPP1R14AQ96A00 147 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 WDR13Q9H1Z4 485 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ANKRD10Q9NXR5 420 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 GSKIPQ9P0R6 139 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 LRIT1Q9P2V4 623 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 TBC1D29Q9UFV1 150 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 MAFFQ9ULX9 164 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM218A2RU14 115 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 H0YGG7 62 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 BCL2L11O43521 198 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ARF3P61204 181 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 PPIAP62937 165 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 MEP1BQ16820 701 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ACOT7LQ6ZUV0 252 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 METTL27Q8N6F8 245 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 TMEM52Q8NDY8 209 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 INTS14Q96SY0 518 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 ZCCHC4Q9H5U6 513 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 FGF22Q9HCT0 170 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 SERTAD3Q9UJW9 196 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC22A7Q9Y694 548 aa11.66□□□□□ -0.54
TRAPPC9-208ENST00000520857 LOC100289279A0A1B0GTE1 492 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 OR2F2O95006 317 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 OR2F1Q13607 317 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 IL10RAQ13651 578 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC35D3Q5M8T2 416 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 COMMD2Q86X83 199 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 YAF2Q8IY57 180 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 FOXRED1Q96CU9 486 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 PHB2Q99623 299 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 HEBP2Q9Y5Z4 205 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 OTOL1A6NHN0 477 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 EIF1AYO14602 144 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 CD14P08571 375 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 ITGA5P08648 1049 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 FAM53BQ14153 422 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 GPR18Q14330 331 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 C2orf27AQ580R0 203 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 IGSF11Q5DX21 431 aa11.65□□□□□ -0.54
TRAPPC9-208ENST00000520857 NKAPLQ5M9Q1 402 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms