RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CCDC36Q8IYA8 594 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TMEM86AQ8N2M4 240 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TCAIMQ8N3R3 496 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 RNF148Q8N7C7 305 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CCNYL1Q8N7R7 359 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 C12orf29Q8N999 325 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZNRF1Q8ND25 227 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 OR1K1Q8NGR3 316 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 OR10T2Q8NGX3 314 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 OR4L1Q8NH43 312 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ENKURQ8TC29 256 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 LRRC20Q8TCA0 184 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DEDD2Q8WXF8 326 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 UFD1Q92890 307 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TESCQ96BS2 214 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZHX1-C8orf76Q96EF9 292 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 NRBF2Q96F24 287 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 AURKBQ96GD4 344 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 C16orf58Q96GQ5 468 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PIWIL1Q96J94 861 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PPP1R2P1Q96PQ5 205 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 MCCC1Q96RQ3 725 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 RBBP8Q99708 897 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 NPAS2Q99743 824 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 MRPL45Q9BRJ2 306 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TTYH2Q9BSA4 534 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DUSP16Q9BY84 665 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 IL22Q9GZX6 179 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SLC26A1Q9H2B4 701 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PPA2Q9H2U2 334 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TMEM245Q9H330 911 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 WDR55Q9H6Y2 383 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 MID1IP1Q9NPA3 183 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 RPRD1BQ9NQG5 326 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 HPS4Q9NQG7 708 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CHRAC1Q9NRG0 131 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 FAM212BQ9NTI7 297 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZCCHC3Q9NUD5 404 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DDX28Q9NUL7 540 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DNAJC11Q9NVH1 559 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CMTM6Q9NX76 183 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TAS2R9Q9NYW1 312 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TECRQ9NZ01 308 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF581Q9P0T4 197 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TRMT6Q9UJA5 497 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SNX6Q9UNH7 406 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PRELID3BQ9Y3B1 194 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 MFHAS1Q9Y4C4 1052 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 NEUROG3Q9Y4Z2 214 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SNX5Q9Y5X3 404 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 FKBP7Q9Y680 259 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 V9GYH0 126 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TSC2P49815 1807 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PARP14Q460N5 1801 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 NUP205Q92621 2012 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 A0A0G2JMZ2 1700 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 LRRC37A2A6NM11 1700 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 LOC285556D6RIA3 1793 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PHIPQ8WWQ0 1821 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TEX48A0A1B0GUV7 120 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CIB4A0PJX0 185 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 FAM92AA1XBS5 289 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 EFCAB10A6NFE3 127 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 MFSD2BA6NFX1 497 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TUBAL3A6NHL2 446 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 OR6C65A6NJZ3 312 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 A8MUA0 341 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PDZK1P1A8MUH7 402 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 LOC110117498-PIK3R3F6TDL0 507 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 G3V3Q6 166 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PLA2G10O15496 165 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 GATCO43716 136 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TSPAN2O60636 221 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 NOL3O60936 208 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 NOS1APO75052 506 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 DUSP11O75319 330 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SRSF10O75494 262 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 WISP3O95389 354 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SEMA4FO95754 770 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ECDO95905 644 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 IFNA14P01570 189 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 OR9G9P0C7N8 305 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 UMPSP11172 480 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SFTPCP11686 197 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PSKH1P11801 424 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 FOSL2P15408 326 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 NCF2P19878 526 aaPredicted RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CPN2P22792 545 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 FASP25445 335 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 GTF2E2P29084 291 aaKnown RBP2.57□□□□□ -2
HMGB1P41-201ENST00000520234 PPP2R1BP30154 601 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CALCRP30988 508 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ADRA1AP35348 466 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 TRIM23P36406 574 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ID1P41134 155 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 SERPINB10P48595 397 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ARHGDIAP52565 204 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 ARHGDIBP52566 201 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 LIMK2P53671 638 aa2.57□□□□□ -2
HMGB1P41-201ENST00000520234 CRYBB1P53674 252 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms