RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 LCATP04180 440 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ALOX5P09917 674 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 OR2T7P0C7T2 308 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 SLC35E2P0CK97 266 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 DBTP11182 482 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 RNH1P13489 461 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 GNSP15586 552 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 CD36P16671 472 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TNNI3P19429 210 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 PTNP21246 168 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 GADD45AP24522 165 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 OPRL1P41146 370 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 GPR4P46093 362 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 PCYT1AP49585 367 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 VBP1P61758 197 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 LSM3P62310 102 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 CDK5Q00535 292 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ST3GAL4Q11206 333 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TSPAN31Q12999 210 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 GINS1Q14691 196 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TRAM2Q15035 370 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TRIP6Q15654 476 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 SSX1Q16384 188 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 DEFB133Q30KQ1 61 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ODF3L2Q3SX64 289 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 C14orf28Q4W4Y0 310 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 EIPR1Q53HC9 387 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 MRPL2Q5T653 305 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ACSM5Q6NUN0 579 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 PAQR6Q6TCH4 344 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 FAM198BQ6UWH4 519 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF620Q6ZNG0 422 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 RASSF6Q6ZTQ3 369 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TMPRSS11FQ6ZWK6 438 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 MEPCEQ7L2J0 689 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 STX19Q8N4C7 294 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 LINC00471Q8N535 108 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 METTL27Q8N6F8 245 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 COX18Q8N8Q8 333 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 CDRT4Q8N9R6 151 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 OR8J1Q8NGP2 316 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 OR4Q3Q8NH05 313 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 THAP6Q8TBB0 222 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 PIGXQ8TBF5 258 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 DYNC2LI1Q8TCX1 351 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 GNPDA2Q8TDQ7 276 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TMEM255BQ8WV15 326 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ACOT11Q8WXI4 607 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 NR4A3Q92570 626 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 MYDGFQ969H8 173 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 DTNBP1Q96EV8 351 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 VSTM2LQ96N03 204 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF582Q96NG8 517 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 GUCD1Q96NT3 240 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 OPALINQ96PE5 141 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TGM7Q96PF1 710 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 OR5M11Q96RB7 305 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 MCHR1Q99705 422 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 SH3GL3Q99963 347 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 PRSS27Q9BQR3 290 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 LMF2Q9BU23 707 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TAPBPLQ9BX59 468 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TSSK6Q9BXA6 273 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 CDCA4Q9BXL8 241 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ANKRD19PQ9H560 264 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 EGLN3Q9H6Z9 239 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 FOLH1BQ9HBA9 442 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ANKHQ9HCJ1 492 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 CLN6Q9NWW5 311 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 CNIH4Q9P003 139 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF223Q9UK11 482 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 IFT52Q9Y366 437 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 RNF215Q9Y6U7 377 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 SPACA6W5XKT8 324 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 TMEM131Q92545 1883 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 DNAH14Q0VDD8 3507 aa4.3□□□□□ -1.72
CTNNA1-212ENST00000518919 SCN3AQ9NY46 2000 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 SPAG17Q6Q759 2223 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 MN1Q10571 1320 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 IGLV5-39A0A0G2JS06 123 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 A0A1B0GVT2 93 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 RPS10-NUDT3A0A1W2PQS6 291 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 TRAPPC13A5PLN9 417 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 DUXAA6NLW8 204 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 EFCAB9A8MZ26 197 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 NPIPB9F8W1W9 429 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 J3QRK9 145 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 SLC33A1O00400 549 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 CDC42EP2O14613 210 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF749O43361 778 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 SPRY3O43610 288 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 OR10H2O60403 315 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 CSO75390 466 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 RBMXL2O75526 392 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 STX11O75558 287 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 CDC123O75794 336 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 KCNK2O95069 426 aa4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 NSA2O95478 260 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-212ENST00000518919 DBIP07108 87 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms