RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SLC22A10Q63ZE4 541 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR2A2Q6IF42 318 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC30A6Q6NXT4 461 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 BLOC1S3Q6QNY0 202 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SCIMPQ6UWF3 145 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 Q6YL49 198 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DGAT2L6Q6ZPD8 337 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RTL4Q6ZR62 310 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DHFR2Q86XF0 187 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 GRAMD2AQ8IUY3 354 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MISPQ8IVT2 679 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR4N5Q8IXE1 308 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 C9orf40Q8IXQ3 194 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SPARTQ8N0X7 666 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PIAS4Q8N2W9 510 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MIER2Q8N344 545 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DHRSXQ8N5I4 330 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PIK3C3Q8NEB9 887 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR7G2Q8NG99 324 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR52R1Q8NGF1 315 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR56A1Q8NGH5 318 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 NDNFQ8TB73 568 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DYNC2LI1Q8TCX1 351 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RNF138Q8WVD3 245 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CYGBQ8WWM9 190 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ASB15Q8WXK1 588 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 HDAC2Q92769 488 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF566Q969W8 418 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 EXOSC8Q96B26 276 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ROPN1LQ96C74 230 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TMCO6Q96DC7 493 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SPACA9Q96E40 222 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC35A4Q96G79 324 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF486Q96H40 463 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RNF170Q96K19 258 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ADGRG7Q96K78 797 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MEGF10Q96KG7 1140 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PPP1R36Q96LQ0 422 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 VSTM2LQ96N03 204 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CCDC115Q96NT0 180 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 TSSK3Q96PN8 268 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RASL10BQ96S79 203 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 STACQ99469 402 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 CITED2Q99967 270 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ARPC5LQ9BPX5 153 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 NABP2Q9BQ15 211 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 BCL7BQ9BQE9 202 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SPATA25Q9BR10 227 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 LMF2Q9BU23 707 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 C1orf50Q9BV19 199 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DUSP26Q9BV47 211 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 FUNDC2Q9BWH2 189 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 EBPLQ9BY08 206 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DPY30Q9C005 99 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 WDR12Q9GZL7 423 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 OR8D2Q9GZM6 311 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SLIRPQ9GZT3 109 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 NXF2Q9GZY0 626 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MUC13Q9H3R2 512 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 PIGUQ9H490 435 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 GLIPR2Q9H4G4 154 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RAD21L1Q9H4I0 556 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RMND5AQ9H871 391 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 Q9N2J8 555 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SPAG4Q9NPE6 437 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 POLE3Q9NRF9 147 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SDHAF3Q9NRP4 125 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SMPD3Q9NY59 655 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 USE1Q9NZ43 259 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ADA2Q9NZK5 511 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MAT2BQ9NZL9 334 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 SH3BP4Q9P0V3 963 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ACTR3BQ9P1U1 418 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 DAPK2Q9UIK4 370 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF223Q9UK11 482 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 FBXO9Q9UK97 447 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 ABCG2Q9UNQ0 655 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 AP3M1Q9Y2T2 418 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 IFT52Q9Y366 437 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 RBMX2Q9Y388 322 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 MRPS18CQ9Y3D5 142 aaKnown RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 FIS1Q9Y3D6 152 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 POLR3HQ9Y535 204 aaPredicted RBP2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 POMT1Q9Y6A1 747 aa2.65□□□□□ -1.99
SCARNA13-201ENST00000516672 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 IGLV3-32A0A0A0MS00 114 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 A0A1W2PQD3 144 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 A0A1W2PRX2 142 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 C2orf72A6NCS6 295 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 METTL15A6NJ78 407 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 LYNX1G3V0Z9 82 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 HRKO00198 91 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 SLC1A7O00341 560 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NR5A2O00482 541 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 RFXANKO14593 260 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TSPAN2O60636 221 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 TRIM3O75382 744 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CBR3O75828 277 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 INMTO95050 263 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NKX2-2O95096 273 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms