RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 FTSJ1Q9UET6 329 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 CHST2Q9Y4C5 530 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 HCFC2Q9Y5Z7 792 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 P2RY2P41231 377 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF684Q5T5D7 378 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PAQR6Q6TCH4 344 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 SHISA6Q6ZSJ9 500 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 PRSS35Q8N3Z0 413 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 HSD17B8Q92506 261 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 ENKD1Q9H0I2 346 aa12.25□□□□□ -0.45
TCOF1-214ENST00000515035 HMX2A2RU54 273 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 HSPB6O14558 160 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 GALR3O60755 368 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CXCL12P48061 93 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 UBE2MP61081 183 aaKnown RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 AQP6Q13520 282 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 HNRNPA1L2Q32P51 320 aaKnown RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 WWTR1Q9GZV5 400 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ZCCHC4Q9H5U6 513 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 A0A087WUU8 490 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 OR5H14A6NHG9 310 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 MBP02144 154 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 EDN1P05305 212 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 MTHFD2P13995 350 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 HTR5AP47898 357 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 SMIM15Q7Z3B0 74 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 FAM185AQ8N0U4 392 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 MMP21Q8N119 569 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CGGBP1Q9UFW8 167 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CD14P08571 375 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 HBQ1P09105 142 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CALCBP10092 127 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CSNK1DP48730 415 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 MFAP5Q13361 173 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 LINC00346Q8IVM7 164 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 GCNT2Q8N0V5 402 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF740Q8NDX6 193 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 OR5L1Q8NGL2 311 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 REEP6Q96HR9 211 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 SEMA4CQ9C0C4 833 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 LTB4R2Q9NPC1 389 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 RYDENQ9NUL5 291 aaKnown RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ASH2LQ9UBL3 628 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 TRAV20A0A0B4J274 112 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 TUBAL3A6NHL2 446 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 F6UZH7 168 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 PRAMEF26H0Y7S4 382 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CPEP16870 476 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ITGB8P26012 769 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 EVX1P49640 407 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 LRRC18Q8N456 261 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 FAM26EQ8N5C1 309 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 OR1J2Q8NGS2 313 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF566Q969W8 418 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF845Q96IR2 970 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 SPNS1Q9H2V7 528 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CSNK1G1Q9HCP0 422 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 MED9Q9NWA0 146 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF230Q9UIE0 474 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 SERINC4A6NH21 518 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 TGOLN2O43493 480 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 SELENOFO60613 162 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF354AO60765 605 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-214ENST00000515035 NXPH3O95157 252 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 PNPP00491 289 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 CHRM2P08172 466 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 PSMB6P28072 239 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 HAGHQ16775 308 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 XKR7Q5GH72 579 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 ZBTB37Q5TC79 503 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 SEH1LQ96EE3 360 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 SUCNR1Q9BXA5 334 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 GLIPR2Q9H4G4 154 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 AK3Q9UIJ7 227 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 USP3Q9Y6I4 520 aa12.24□□□□□ -0.45
TCOF1-214ENST00000515035 PHOX2AO14813 284 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 SUSD5O60279 629 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ZIC2O95409 532 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 SLC19A1P41440 591 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ELLP55199 621 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 VAMP3Q15836 100 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 GLIPR1L1Q6UWM5 242 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 OLIG3Q7RTU3 272 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 TAS1R1Q7RTX1 841 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 DUS3LQ96G46 650 aaKnown RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 UBL7Q96S82 380 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 TEAD3Q99594 435 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 SLC46A2Q9BY10 475 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 KCNIP2Q9NS61 270 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ACER3Q9NUN7 267 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 B3GALT5Q9Y2C3 310 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 MYO9BQ13459 2157 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 HOXA1P49639 335 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-214ENST00000515035 RAB1AP62820 205 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ABHD17BQ5VST6 288 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 ANGPTL5Q86XS5 388 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 BAP18Q8IXM2 172 aa12.23□□□□□ -0.45
TCOF1-214ENST00000515035 SCPEP1Q9HB40 452 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms