RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 OR51A7Q8NH64 312 aa21.15■□□□□ 0.98
SNF8-213ENST00000514929 HDAC2Q92769 488 aaKnown RBP21.15■□□□□ 0.98
SNF8-213ENST00000514929 DOK1Q99704 481 aa21.15■□□□□ 0.98
SNF8-213ENST00000514929 DYNLRB1Q9NP97 96 aa21.15■□□□□ 0.98
SNF8-213ENST00000514929 TRAV27A0A087WT01 109 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 A0A087WUU8 490 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 A0A096LNT2 108 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 CD5LO43866 347 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 PRSS23O95084 383 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 ERCC1P07992 297 aaPredicted RBP21.14■□□□□ 0.97
SNF8-213ENST00000514929 NR2C1P13056 603 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 CTXN1P60606 82 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 RPL27P61353 136 aaKnown RBP21.14■□□□□ 0.97
SNF8-213ENST00000514929 LOXL1Q08397 574 aaPredicted RBP21.14■□□□□ 0.97
SNF8-213ENST00000514929 CARTPTQ16568 116 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 C10orf128Q5T292 105 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 MBOAT2Q6ZWT7 520 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 IGFN1Q86VF2 1251 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 ZNF584Q8IVC4 421 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 TNFRSF13CQ96RJ3 184 aa21.14■□□□□ 0.97
SNF8-213ENST00000514929 FAM32AQ9Y421 112 aaKnown RBP21.14■□□□□ 0.97
SNF8-213ENST00000514929 TMEM129A0AVI4 362 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 GPRIN2O60269 458 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 SLC2A10O95528 541 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 GLRXP35754 106 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 SLC9A3P48764 834 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 ZNF133P52736 654 aaPredicted RBP21.13■□□□□ 0.97
SNF8-213ENST00000514929 RPS23P62266 143 aaKnown RBP21.13■□□□□ 0.97
SNF8-213ENST00000514929 ANKDD1AQ495B1 522 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 TBPL2Q6SJ96 375 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 LRRC18Q8N456 261 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 SLC30A7Q8NEW0 376 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 OR13C2Q8NGS9 318 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 MRPL24Q96A35 216 aaKnown RBP21.13■□□□□ 0.97
SNF8-213ENST00000514929 KCNK17Q96T54 332 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 KCNN2Q9H2S1 579 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 ANKRD19PQ9H560 264 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 NMNAT1Q9HAN9 279 aaPredicted RBP21.13■□□□□ 0.97
SNF8-213ENST00000514929 SMURF2Q9HAU4 748 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 MYOZ1Q9NP98 299 aaPredicted RBP21.13■□□□□ 0.97
SNF8-213ENST00000514929 YAE1D1Q9NRH1 226 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 SLC7A8Q9UHI5 535 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 ZNF346Q9UL40 294 aaKnown RBP21.13■□□□□ 0.97
SNF8-213ENST00000514929 SAMD4AQ9UPU9 718 aaKnown RBP21.13■□□□□ 0.97
SNF8-213ENST00000514929 ARL2BPQ9Y2Y0 163 aa21.13■□□□□ 0.97
SNF8-213ENST00000514929 NDUFS8O00217 210 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 TLX2O43763 284 aaPredicted RBP21.12■□□□□ 0.97
SNF8-213ENST00000514929 MGRN1O60291 552 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 IGHMP01871 453 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 GPR4P46093 362 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 FMODQ06828 376 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 TMEM249Q2WGJ8 235 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 NSMAFQ92636 917 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 RBP7Q96R05 134 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 PIMREGQ9BSJ6 248 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 ALG12Q9BV10 488 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 C1orf198Q9H425 327 aa21.12■□□□□ 0.97
SNF8-213ENST00000514929 LOC390937A0A1W2PQ73 354 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 PTHP01270 115 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 H1F0P07305 194 aaKnown RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 TCN1P20061 433 aaPredicted RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 CDAP32320 146 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 MRPS34P82930 218 aaKnown RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 PLP2Q04941 152 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 FAM205BPQ63HN1 556 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 TSEN54Q7Z6J9 526 aaKnown RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 ZCCHC24Q8N2G6 241 aaKnown RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 LRRC75AQ8NAA5 344 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 FAM156AQ8NDB6 213 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 NEU4Q8WWR8 484 aaPredicted RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 NMD3Q96D46 503 aaKnown RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 LRRC37BQ96QE4 947 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 MRPL37Q9BZE1 423 aaKnown RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 SIAEQ9HAT2 523 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 CDH20Q9HBT6 801 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 DCAF13Q9NV06 445 aaKnown RBP21.11■□□□□ 0.97
SNF8-213ENST00000514929 TMEM5Q9Y2B1 443 aa21.11■□□□□ 0.97
SNF8-213ENST00000514929 IQCMA0A1B0GVH7 501 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 DCTN3O75935 186 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 ADRA2AP08913 450 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 USF1P22415 310 aaPredicted RBP21.1■□□□□ 0.97
SNF8-213ENST00000514929 RPL4P36578 427 aaKnown RBP21.1■□□□□ 0.97
SNF8-213ENST00000514929 EVX1P49640 407 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 SGCAQ16586 387 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 FXNQ16595 210 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 MSMPQ1L6U9 139 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 FGD3Q5JSP0 725 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 THEM4Q5T1C6 240 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 TMPRSS11FQ6ZWK6 438 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 FNDC8Q8TC99 324 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 SLC7A13Q8TCU3 470 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 TSPAN32Q96QS1 320 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 SYT3Q9BQG1 590 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 CCNB1IP1Q9NPC3 277 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 NDUFAF4Q9P032 175 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 TAGLN3Q9UI15 199 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 UGT2A1Q9Y4X1 527 aa21.1■□□□□ 0.97
SNF8-213ENST00000514929 IGKV1D-43A0A0B4J1Z2 117 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 SLC22A23A1A5C7 686 aa21.09■□□□□ 0.97
SNF8-213ENST00000514929 A6NIZ1 184 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms