RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 LSRQ86X29 649 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 CCDC71Q8IV32 467 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 TMEM123Q8N131 208 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 LILRB4Q8NHJ6 448 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 FAM81AQ8TBF8 368 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 TMEM163Q8TC26 289 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 ITLN2Q8WWU7 325 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 TFAP2CQ92754 450 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 HDAC2Q92769 488 aaKnown RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 RFKQ969G6 155 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 TMEM54Q969K7 222 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 MCHR2Q969V1 340 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 RASD2Q96D21 266 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 CCDC120Q96HB5 630 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 MBOAT4Q96T53 435 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 KCNK17Q96T54 332 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 NMNAT3Q96T66 252 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF184Q99676 751 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 ADI1Q9BV57 179 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 ULBP2Q9BZM5 246 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 FN3KQ9H479 309 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 SRA1Q9HD15 236 aaKnown RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 ELOVL5Q9NYP7 299 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 VSX1Q9NZR4 365 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-214ENST00000513989 RAB26Q9ULW5 256 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 RNF6Q9Y252 685 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 HSPE1-MOB4S4R3N1 261 aa8.97□□□□□ -0.97
NEDD9-214ENST00000513989 NF1P21359 2839 aa8.96□□□□□ -0.97
NEDD9-214ENST00000513989 A8MXE2 369 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 RPL36A-HNRNPH2H7BZ11 118 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 SLC16A7O60669 478 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 CGAP01215 116 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 NPR2P20594 1047 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 MPGP29372 298 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 NTF4P34130 210 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 AQP4P55087 323 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 SNRPGP62308 76 aaKnown RBP8.96□□□□□ -0.98
NEDD9-214ENST00000513989 ADARB1P78563 741 aaKnown RBP8.96□□□□□ -0.98
NEDD9-214ENST00000513989 IL5RAQ01344 420 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 ROR2Q01974 943 aaKnown RBP8.96□□□□□ -0.98
NEDD9-214ENST00000513989 GLO1Q04760 184 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 RUNX1T1Q06455 604 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 FAPQ12884 760 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 HIST3H3Q16695 136 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 MESTQ5EB52 335 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 TSPO2Q5TGU0 170 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 MEDAGQ5VYS4 303 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 OR7E24Q6IFN5 339 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 TFAP2EQ6VUC0 442 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 CXXC5Q7LFL8 322 aaKnown RBP8.96□□□□□ -0.98
NEDD9-214ENST00000513989 GLB1L2Q8IW92 636 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 CCDC36Q8IYA8 594 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 C8orf59Q8N0T1 100 aaPredicted RBP8.96□□□□□ -0.98
NEDD9-214ENST00000513989 TCEANCQ8N8B7 351 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 ZNF610Q8N9Z0 462 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 SLC37A3Q8NCC5 494 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 NAXEQ8NCW5 288 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 NPEPL1Q8NDH3 523 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 SDR9C7Q8NEX9 313 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 NOXO1Q8NFA2 376 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 PROKR2Q8NFJ6 384 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 NSMAFQ92636 917 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 MARVELD3Q96A59 401 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 IL4I1Q96RQ9 567 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 SYT4Q9H2B2 425 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 KCNN2Q9H2S1 579 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 RERGLQ9H628 205 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 CRLF2Q9HC73 371 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 RPRD1BQ9NQG5 326 aaKnown RBP8.96□□□□□ -0.98
NEDD9-214ENST00000513989 SLC7A10Q9NS82 523 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 CLN6Q9NWW5 311 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 FOXD3Q9UJU5 478 aaPredicted RBP8.96□□□□□ -0.98
NEDD9-214ENST00000513989 MOKQ9UQ07 419 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 FKBP7Q9Y680 259 aa8.96□□□□□ -0.98
NEDD9-214ENST00000513989 PHF3Q92576 2039 aaKnown RBP8.95□□□□□ -0.98
NEDD9-214ENST00000513989 CIB4A0PJX0 185 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 OR6C68A6NDL8 312 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 DLGAP1O14490 977 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 DHHO43323 396 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 TMCC2O75069 709 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 UPK3AO75631 287 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 FARS2O95363 451 aaKnown RBP8.95□□□□□ -0.98
NEDD9-214ENST00000513989 IGHV3-9P01782 118 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 PAX7P23759 505 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 HOXC12P31275 282 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 TMED1Q13445 227 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 CRMP1Q14194 572 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 KLHL12Q53G59 568 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 SLC35D3Q5M8T2 416 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 SLC25A30Q5SVS4 291 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 ZNF362Q5T0B9 420 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-214ENST00000513989 C6orf52Q5T4I8 152 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 PLBD1Q6P4A8 553 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 LRFN4Q6PJG9 635 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 SSX8Q7RTT4 187 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 THAP5Q7Z6K1 395 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 LUZP2Q86TE4 346 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 ZBTB46Q86UZ6 589 aa8.95□□□□□ -0.98
NEDD9-214ENST00000513989 CPOQ8IVL8 374 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms