RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 TMEM265A0A087WTH1 108 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 DVL2O14641 736 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 CER1O95813 267 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 OR4E1P0C645 316 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 MAKP20794 623 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 CLRN1P58418 232 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SSTP61278 116 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 ACTBL2Q562R1 376 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 TMEM31Q5JXX7 168 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SULF2Q8IWU5 870 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 TOMM40LQ969M1 308 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 MYEOVQ96EZ4 313 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SPIN2AQ99865 258 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SPIN2BQ9BPZ2 258 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 NELFAQ9H3P2 528 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 FN3KRPQ9HA64 309 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PDFQ9HBH1 243 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PCDHB10Q9UN67 800 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 MOKQ9UQ07 419 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PYCARD-AS1I3L0S3 204 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 STK17BO94768 372 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 NDUFB6O95139 128 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 OR2C1O95371 312 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PEX11BO96011 259 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 NQO2P16083 231 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 CCSMST1Q4G0I0 132 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 ELFN2Q5R3F8 820 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 RNLSQ5VYX0 342 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 MCATQ8IVS2 390 aaKnown RBP10.34□□□□□ -0.75
TCOF1-211ENST00000513346 GABRG1Q8N1C3 465 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SMIM19Q96E16 107 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 RNF215Q9Y6U7 377 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 CRTAPO75718 401 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SMIM6P0DI80 62 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 GABRA1P14867 456 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PVRP15151 417 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 TAGLN2P37802 199 aaKnown RBP10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SELENOPP49908 381 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 P2RX1P51575 399 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 EMP2P54851 167 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 PLP2Q04941 152 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 RSU1Q15404 277 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SYS1Q8N2H4 156 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 FAM213BQ8TBF2 198 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 CMTM3Q96MX0 182 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 SPACA1Q9HBV2 294 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 TUBG2Q9NRH3 451 aa10.34□□□□□ -0.75
TCOF1-211ENST00000513346 C17orf113A0A1B0GUU1 675 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 C7orf66A4D0T2 115 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 OR5K3A6NET4 321 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 VSTM2BA6NLU5 285 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 NME1P15531 152 aaKnown RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 MVDP53602 400 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SLC26A5P58743 744 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 PRDX1Q06830 199 aaKnown RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 OR2W3Q7Z3T1 314 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SLC43A2Q8N370 569 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 GCDHQ92947 438 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 RAB39BQ96DA2 213 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 NMNAT3Q96T66 252 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 WDR77Q9BQA1 342 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SUSD5O60279 629 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 TMEM127O75204 238 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 AIFM1O95831 613 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 P04436 131 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 PSMB5P28074 263 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 YPEL5P62699 121 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 CDK5Q00535 292 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 CDK5R1Q15078 307 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 FAM109BQ6ICB4 259 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 LAIR2Q6ISS4 152 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 Q6ZTK2 550 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 OR51T1Q8NGJ9 327 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 ASB17Q8WXJ9 295 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 HOXB13Q92826 284 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SLC41A2Q96JW4 573 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 NIPSNAP3BQ9BS92 247 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 ENKD1Q9H0I2 346 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 TMPRSS5Q9H3S3 457 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 STARD5Q9NSY2 213 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 GAR1Q9NY12 217 aaKnown RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 ASH2LQ9UBL3 628 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SDHAP31040 664 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 RAP1AP62834 184 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 CAMK2DQ13557 499 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SGCAQ16586 387 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 CAMKMTQ7Z624 323 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 TECPR1Q7Z6L1 1165 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 OR13C9Q8NGT0 318 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 GOT1L1Q8NHS2 421 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 SFT2D1Q8WV19 159 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 INSM2Q96T92 566 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 TSPAN10Q9H1Z9 355 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 PPP1R3EQ9H7J1 279 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 EXOSC3Q9NQT5 275 aaKnown RBP10.33□□□□□ -0.76
TCOF1-211ENST00000513346 C2orf42Q9NWW7 574 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 LRIT1Q9P2V4 623 aa10.33□□□□□ -0.76
TCOF1-211ENST00000513346 B3GALT1Q9Y5Z6 326 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms