RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 THEM4Q5T1C6 240 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 MROH9Q5TGP6 573 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 METTL11BQ5VVY1 283 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 ZNF841Q6ZN19 808 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 C3orf62Q6ZUJ4 267 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 TRIM46Q7Z4K8 759 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 DTX3Q8N9I9 347 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 MFSD8Q8NHS3 518 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 SLC25A40Q8TBP6 338 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 PNPT1Q8TCS8 783 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 KLF14Q8TD94 323 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 NPRL2Q8WTW4 380 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 MTERF3Q96E29 417 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 RCHY1Q96PM5 261 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 CCT7Q99832 543 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 ULBP2Q9BZM5 246 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 SEMA6AQ9H2E6 1030 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 LRMDAQ9H2I8 198 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 POLE3Q9NRF9 147 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 STK38LQ9Y2H1 464 aa6.32□□□□□ -1.4
DEPDC1B-205ENST00000512078 A0A096LPI6 279 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 LOC102725191A0A1B0GVB3 256 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 H3BSA7 217 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 PF4P02776 101 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SBK3P0C264 359 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 PF4V1P10720 104 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 UQCRBP14927 111 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 FAHP16930 419 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 TNFSF4P23510 183 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 PRPH2P23942 346 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SERPINB8P50452 374 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 PKNOX1P55347 436 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 EPS8Q12929 822 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CALCOCO2Q13137 446 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SPDYE7PQ495Y7 208 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 MTX3Q5HYI7 312 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 ZNF678Q5SXM1 525 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SPATA46Q5T0L3 261 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CARD17Q5XLA6 110 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 C16orf62Q7Z3J2 963 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 ITLN1Q8WWA0 313 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 FCRL1Q96LA6 429 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 MRPL57Q9BQC6 102 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CHID1Q9BWS9 393 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 RNF121Q9H920 327 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SERTAD4Q9NUC0 356 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 IL19Q9UHD0 177 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 WDR45Q9Y484 360 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 MAB21L2Q9Y586 359 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 MUC4Q99102 2169 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 EIF3HO15372 352 aaKnown RBP eCLIP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 ENTPD5O75356 428 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 ZNF205O95201 554 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 AHSA1O95433 338 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CHRM2P08172 466 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SNRPBP14678 240 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SDC1P18827 310 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 MATN1P21941 496 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CHATP28329 748 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 GTF2E2P29084 291 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 NPY4RP50391 375 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 FOXA1P55317 472 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 RPS26P62854 115 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CAV1Q03135 178 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 XKR7Q5GH72 579 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 TMEM53Q6P2H8 277 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 DPPA2Q7Z7J5 298 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 ZNF101Q8IZC7 436 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 SLC22A24Q8N4F4 322 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 PNLDC1Q8NA58 520 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 STK35Q8TDR2 534 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 OR5P2Q8WZ92 322 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 DDB2Q92466 427 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 MAGEB18Q96M61 343 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 TSSK3Q96PN8 268 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 TMEM237Q96Q45 408 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CITED4Q96RK1 184 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 PTDSS2Q9BVG9 487 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 OR2J1Q9GZK6 312 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 MRPL46Q9H2W6 279 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 GCM1Q9NP62 436 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 INPP5EQ9NRR6 644 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 ZMAT5Q9UDW3 170 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 CCL27Q9Y4X3 112 aa6.31□□□□□ -1.4
DEPDC1B-205ENST00000512078 IQCMA0A1B0GVH7 501 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 CFAP73A6NFT4 308 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 H0YHG0 523 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 AIM2O14862 343 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 SEC22BO75396 215 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 APLNRP35414 380 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 WNT5AP41221 380 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 CRATP43155 626 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 MAGEA12P43365 314 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 CRIP3Q6Q6R5 217 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 LYPD2Q6UXB3 125 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 UNQ6126/PRO20091Q6UXV3 157 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 DCDC5Q6ZRR9 648 aa6.3□□□□□ -1.4
DEPDC1B-205ENST00000512078 HMGN2P46Q86SG4 172 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms