RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 FIP1L1Q6UN15 594 aaKnown RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 C5orf46Q6UWT4 87 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 UEVLDQ8IX04 471 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 ANKFN1Q8N957 763 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 SLC30A7Q8NEW0 376 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 OR1J2Q8NGS2 313 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 PNPT1Q8TCS8 783 aaKnown RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 KTI12Q96EK9 354 aaPredicted RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 NSRP1Q9H0G5 558 aaKnown RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 LRMDAQ9H2I8 198 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 EGFL7Q9UHF1 273 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 C5orf63A6NC05 138 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 CD80P33681 288 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 LIPAP38571 399 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 BPIFB3P59826 476 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 TMEM155Q4W5P6 130 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 KPRPQ5T749 579 aaPredicted RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 FAM69AQ5T7M9 428 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 LRRN1Q6UXK5 716 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 SKA3Q8IX90 412 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 ADPRHL1Q8NDY3 354 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 C10orf82Q8WW14 230 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 GTF3AQ92664 365 aaKnown RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 UPRTQ96BW1 309 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 SLC35A5Q9BS91 424 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 CCDC28BQ9BUN5 200 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 EMC6Q9BV81 110 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 ULBP2Q9BZM5 246 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 CDH20Q9HBT6 801 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 TCF7L1Q9HCS4 588 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 NOX4Q9NPH5 578 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 KLHL14Q9P2G3 628 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 KLHL21Q9UJP4 597 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 SOX21Q9Y651 276 aaPredicted RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 DNAH3Q8TD57 4116 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 PLSCR5A0PG75 271 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ZNF726A6NNF4 738 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 MS4A18H0YCH9 400 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 M0R082 166 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 SPRY3O43610 288 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 TSPAN15O95858 294 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 IGHV1-46P01743 117 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 IGHV2-70P01814 119 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ADH4P08319 380 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 PATE4P0C8F1 98 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 NR2F1P10589 423 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 CPT2P23786 658 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ERVS71-1P61550 626 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 UFM1P61960 85 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 PMS2P3Q13401 168 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 TBC1D28Q2M2D7 210 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 C2orf68Q2NKX9 166 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 SMU1Q2TAY7 513 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 MS4A18Q3C1V0 323 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 LIN52Q52LA3 116 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 VAX1Q5SQQ9 334 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 OGFOD2Q6N063 350 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 BTNL3Q6UXE8 466 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 Q6YL49 198 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 DPPA2Q7Z7J5 298 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 JAZF1Q86VZ6 243 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ANKRD46Q86W74 232 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 LRRC28Q86X40 367 aaPredicted RBP9.74□□□□□ -0.85
RNF4-216ENST00000511859 SLC22A24Q8N4F4 322 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 OR6N1Q8NGY5 312 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 OR52P1PQ8NH57 321 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 FGFBP3Q8TAT2 258 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ZNF417Q8TAU3 575 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 TEX37Q96LM6 180 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ZNF587Q96SQ5 575 aaPredicted RBP9.74□□□□□ -0.85
RNF4-216ENST00000511859 OR51B6Q9H340 312 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ARMC7Q9H6L4 198 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 CYSLTR2Q9NS75 346 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 AIG1Q9NVV5 245 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ASIC5Q9NY37 505 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ASH2LQ9UBL3 628 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 OR5V1Q9UGF6 321 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ZDHHC8Q9ULC8 765 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 ZNF232Q9UNY5 417 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 POMT1Q9Y6A1 747 aa9.74□□□□□ -0.85
RNF4-216ENST00000511859 IGHV3OR16-10A0A075B7F0 116 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 SHOX2O60902 331 aaPredicted RBP9.73□□□□□ -0.85
RNF4-216ENST00000511859 MFN2O95140 757 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 CCL2P13500 99 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 GRPRP30550 384 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 MMP15P51511 669 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 LARS2Q15031 903 aaKnown RBP9.73□□□□□ -0.85
RNF4-216ENST00000511859 DEFB112Q30KQ8 113 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 ZNF718Q3SXZ3 478 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 ESCO2Q56NI9 601 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 RNF220Q5VTB9 566 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 TMEM53Q6P2H8 277 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 NHLRC1Q6VVB1 395 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 ZNF836Q6ZNA1 936 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 ZNF620Q6ZNG0 422 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 VRK2Q86Y07 508 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 PAQR4Q8N4S7 273 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms