RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 C21orf33P30042 268 aaPredicted RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 SRP9P49458 86 aaKnown RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 TPMTP51580 245 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 UBE2KP61086 200 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR5I1Q13606 314 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OPCMLQ14982 345 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 PGGHGQ32M88 737 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 PHYHD1Q5SRE7 291 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 FAM122CQ6P4D5 195 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ANKRD16Q6P6B7 361 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SSX9Q7RTT3 188 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 MOB3BQ86TA1 216 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 GDPD1Q8N9F7 314 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 WDR31Q8NA23 367 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 TERB2Q8NHR7 220 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 GGHQ92820 318 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 FYTTD1Q96QD9 318 aaKnown RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 ZNF300Q96RE9 604 aaPredicted RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 SAV1Q9H4B6 383 aaPredicted RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 ZNF346Q9UL40 294 aaKnown RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 ARFGEF1Q9Y6D6 1849 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CCDC187A0A096LP49 1063 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CDHR4A6H8M9 788 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 TMEM212A6NML5 194 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 NXPH3O95157 252 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ACKR3P25106 362 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SLC19A1P41440 591 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SH3BP2P78314 561 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 YOD1Q5VVQ6 348 aaPredicted RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 OR8G2PQ6IF36 304 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ZNF425Q6IV72 752 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 LETMD1Q6P1Q0 360 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 TRILQ7L0X0 811 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CDC20BQ86Y33 519 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR5M1Q8NGP8 315 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 COQ10AQ96MF6 247 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 HRH4Q9H3N8 390 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 BCO1Q9HAY6 547 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 NOX4Q9NPH5 578 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ZNF331Q9NQX6 463 aaPredicted RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 PTTG3PQ9NZH4 202 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 DNAJC15Q9Y5T4 150 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 LRIT2A6NDA9 550 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR6C65A6NJZ3 312 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 RNASEK-C17orf49H0YIS7 233 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 K7EQS6 105 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CSO75390 466 aaKnown RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 RFPL3O75679 317 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 C7P10643 843 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CSNK1DP48730 415 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 PGGT1BP53609 377 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 Q1RN00 199 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 GTDC1Q4AE62 458 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 RPL7L1Q6DKI1 246 aaKnown RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 TMEM211Q6ICI0 200 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CNIH2Q6PI25 160 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 FAM111BQ6SJ93 734 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 DPPA2Q7Z7J5 298 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 MARCH3Q86UD3 253 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 TMEM217Q8N7C4 229 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR11G2Q8NGC1 345 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR2AE1Q8NHA4 323 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 WBP2Q969T9 261 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CCDC106Q9BWC9 280 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ZCCHC4Q9H5U6 513 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 IL37Q9NZH6 218 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 FOCADQ5VW36 1801 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 MEIKINA0A087WXM9 373 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 TMEM72A0PK05 275 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 P2RY10O00398 339 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CAPNS1P04632 268 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 FAM157BP0CG42 384 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SOX18P35713 384 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 MAGEB1P43366 347 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 RPL34P49207 117 aaKnown RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 HNRNPFP52597 415 aaKnown RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 RAB40BQ12829 278 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 VEZF1Q14119 521 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 LRRC10Q5BKY1 277 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SERPINA11Q86U17 422 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ISCA2Q86U28 154 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 TUSC5Q8IXB3 177 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR1S2Q8NGQ3 325 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR13C2Q8NGS9 318 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR8U1Q8NH10 309 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR5B3Q8NH48 314 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR51E2Q9H255 320 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 HRH3Q9Y5N1 445 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 OR2M5A3KFT3 312 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 NDUFB3O43676 98 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CTNSO60931 367 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 NUDT7P0C024 238 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 RAB40ALP0C0E4 278 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SRFP11831 508 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 HTR2CP28335 458 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CPZQ66K79 652 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 RGS7BPQ6MZT1 257 aaPredicted RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 PARM1Q6UWI2 310 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 CCBE1Q6UXH8 406 aaPredicted RBP5.32□□□□□ -1.56
USP38-203ENST00000511739 PRSS48Q7RTY5 328 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms