RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 IL20RAQ9UHF4 553 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC7A8Q9UHI5 535 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 RPS6KA6Q9UK32 745 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF346Q9UL40 294 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 SAMD4AQ9UPU9 718 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 MED31Q9Y3C7 131 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 NOX1Q9Y5S8 564 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ACANP16112 2415 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 NF1P21359 2839 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 ZFHX3Q15911 3703 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 USF3Q68DE3 2245 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CREBBPQ92793 2442 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 MTORP42345 2549 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 TCRBV3S1A0A5B6 114 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 NPIPB13A6NJU9 1138 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 EFCAB9A8MZ26 197 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 NPIPB4C9JG80 1138 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 E7EQL1 145 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF587BE7ETH6 402 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 ATP6V1G2-DDX39BF2Z307 99 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 F8W735 103 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC43A1O75387 559 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CD8AP01732 235 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 HLA-HP01893 362 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 FABP3P05413 133 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CECR9P0C854 216 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 DANCRP0C864 163 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 UMPSP11172 480 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 PPP3CBP16298 524 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 RHCEP18577 417 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CDH2P19022 906 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 AHCYP23526 432 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CD40P25942 277 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 PEX19P40855 299 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 GSSP48637 474 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 SPIBQ01892 262 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CCNIQ14094 377 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 TRIM25Q14258 630 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 MFSD13AQ14CX5 517 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 SPATS1Q496A3 300 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 C11orf71Q6IPW1 123 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 KLHL17Q6TDP4 642 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 FOXL2NBQ6ZUU3 175 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 LHFPL2Q6ZUX7 228 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 PTCHD4Q6ZW05 846 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 TMPRSS11FQ6ZWK6 438 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 FKBP9P1Q75LS8 142 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 PIWIL3Q7Z3Z3 882 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 MDP1Q86V88 176 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 LURAP1LQ8IV03 231 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 ZDHHC21Q8IVQ6 265 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 C17orf78Q8N4C9 275 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 PAQR4Q8N4S7 273 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 POMGNT2Q8NAT1 580 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 OR52J3Q8NH60 311 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 OR51A7Q8NH64 312 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 OR6X1Q8NH79 312 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 RNF141Q8WVD5 230 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CANT1Q8WVQ1 401 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 RSRC1Q96IZ7 334 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 Q96M85 177 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 CCDC140Q96MF4 163 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 GPX7Q96SL4 187 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 THTPAQ9BU02 230 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 FNDC11Q9BVV2 318 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 LRMDAQ9H2I8 198 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 B3GNT2Q9NY97 397 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 POMPQ9Y244 141 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 SIGLEC7Q9Y286 467 aa6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 MAGED1Q9Y5V3 778 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-207ENST00000509162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 TEX13CA0A0J9YWL9 993 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF99A8MXY4 864 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 BLOC1S5-TXNDC5H3BN57 136 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 M0R1B8 84 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 DCTN6O00399 190 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ABCD4O14678 606 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 HS3ST1O14792 307 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 GSC2O15499 205 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 RNF13O43567 381 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 MGRN1O60291 552 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 NDUFS7O75251 213 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 GOSR1O95249 250 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 GPANK1O95872 356 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 WNT11O96014 354 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 IGKV3-15P01624 115 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 MMP7P09237 267 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 CTLA4P16410 223 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 FPR3P25089 353 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 HOXC12P31275 282 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 CDAP32320 146 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 CSNK1A1P48729 337 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC9A3P48764 834 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ERVK-25P63136 954 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 IL1RL1Q01638 556 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 HGFACQ04756 655 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 HNRNPA0Q13151 305 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 C1DQ13901 141 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ETFDHQ16134 617 aa6.25□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF672Q499Z4 452 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms