RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 IL12BP29460 328 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 ADH7P40394 386 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF81P51508 661 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 HCCSP53701 268 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 RAP2BP61225 183 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 PLCXD2Q0VAA5 305 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 Q499Y3 187 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF684Q5T5D7 378 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 FAM69BQ5VUD6 431 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 HLA-DQA1Q5Y7H0 255 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 GLDNQ6ZMI3 551 aaPredicted RBP9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 SLC29A4Q7RTT9 530 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 JAZF1Q86VZ6 243 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 PPP1R3BQ86XI6 285 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 OR2T35Q8NGX2 323 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 SMAP2Q8WU79 429 aaPredicted RBP9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 MIB2Q96AX9 1013 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 DERL3Q96Q80 235 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 PDCD1LG2Q9BQ51 273 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 TMPRSS13Q9BYE2 586 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 AKIRIN1Q9H9L7 192 aaPredicted RBP9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 TAS2R10Q9NYW0 307 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 KCNN3Q9UGI6 736 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 RCE1Q9Y256 329 aa9.97□□□□□ -0.81
SH3RF1-203ENST00000508685 ANKRD20A5PA0PJZ0 165 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 D6RAR5 112 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 M0R233 179 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 PHYHO14832 338 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF264O43296 627 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 HEXBP07686 556 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 BLVRAP53004 296 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 DCDP81605 110 aaKnown RBP9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF117Q03924 483 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 TMEM69Q5SWH9 247 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 WBP2NLQ6ICG8 309 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 SLC23A3Q6PIS1 610 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 FCRLAQ7L513 359 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 NLRC3Q7RTR2 1065 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 PRSS45Q7RTY3 260 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 MARCH3Q86UD3 253 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 APCDD1LQ8NCL9 501 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 PLPP5Q8NEB5 264 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 CEP76Q8TAP6 659 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 THAP3Q8WTV1 239 aaPredicted RBP9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 ASB13Q8WXK3 278 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 OMA1Q96E52 524 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 NMNAT3Q96T66 252 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 ALG12Q9BV10 488 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 DPCDQ9BVM2 203 aaPredicted RBP9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 GSX2Q9BZM3 304 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 NOX3Q9HBY0 568 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 KIF25Q9UIL4 384 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 FOXJ3Q9UPW0 622 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 HIF3AQ9Y2N7 669 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 TMEM14AQ9Y6G1 99 aa9.96□□□□□ -0.81
SH3RF1-203ENST00000508685 IGKV1D-42A0A075B6H8 117 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 A0A0B4J203 849 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 OR6C68A6NDL8 312 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 PIN1P1O15428 100 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 HCRTR2O43614 444 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 CREBL2O60519 120 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 SELENOFO60613 162 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 TSPAN2O60636 221 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 TXNDC12O95881 172 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 CD14P08571 375 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 DCAF7P61962 342 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 PUDPQ08623 228 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ALKBH1Q13686 389 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 RNASE12Q5GAN4 147 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 TOR2AQ5JU69 321 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 HES5Q5TA89 166 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 SFRP4Q6FHJ7 346 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 DNM1P46Q6ZS02 220 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ANKRD37Q7Z713 158 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 SYT9Q86SS6 491 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 RFLNBQ8N5W9 214 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF441Q8N8Z8 693 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 OR6K6Q8NGW6 343 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 OR52I2Q8NH67 350 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 OR5AK2Q8NH90 309 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF417Q8TAU3 575 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 SYNPRQ8TBG9 265 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ADAD1Q96M93 576 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 METTL17Q9H7H0 456 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 C12orf10Q9HB07 376 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 MRTO4Q9UKD2 239 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 COPS3Q9UNS2 423 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 TMA7Q9Y2S6 64 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 TRBV5-5A0A0J9YX44 114 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ELOA3DA6NLF2 546 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ZFPL1O95159 310 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 WISP1O95388 367 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 HPXP02790 462 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 PSMB10P40306 273 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 PTH2RP49190 550 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 RNF4P78317 190 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms