RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ZNF134P52741 427 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SMSP52788 366 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 UGT2B15P54855 530 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR2B6P58173 313 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 PRPS1P60891 318 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 RPS7P62081 194 aaKnown RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 COL10A1Q03692 680 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SRYQ05066 204 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 COX10Q12887 443 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FOXI1Q12951 378 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 DYRK1AQ13627 763 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 PON3Q15166 354 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR7A5Q15622 319 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ATP6AP1Q15904 470 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 HSPB2Q16082 182 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 C3AR1Q16581 482 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 MICAQ29983 383 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 PLA1AQ53H76 456 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FGD3Q5JSP0 725 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 TMEM225Q6GV28 225 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ABLIM2Q6H8Q1 611 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 RPL13AP3Q6NVV1 102 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 C1orf94Q6P1W5 598 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 PODNL1Q6PEZ8 512 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 WDR88Q6ZMY6 472 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 H1FNTQ75WM6 255 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FCRLAQ7L513 359 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 HDDC2Q7Z4H3 204 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 HIPK1Q86Z02 1210 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 MCEMP1Q8IX19 187 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SVOPLQ8N434 492 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 BEND2Q8NDZ0 799 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ATP6V1C2Q8NEY4 427 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR5M9Q8NGP3 310 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR5J2Q8NH18 312 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR5K1Q8NHB7 308 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 GNPDA2Q8TDQ7 276 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 RNF128Q8TEB7 428 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 TMEM255BQ8WV15 326 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ASB5Q8WWX0 329 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 RND1Q92730 232 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 TAAR8Q969N4 342 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SLCO4A1Q96BD0 722 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 BPIFA2Q96DR5 249 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 KTI12Q96EK9 354 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CENPNQ96H22 339 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 GMPPAQ96IJ6 420 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 PSD2Q9BQI7 771 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 TTYH2Q9BSA4 534 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FUZQ9BT04 418 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 PTDSS2Q9BVG9 487 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SFXN3Q9BWM7 321 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 DGCR6LQ9BY27 220 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR11A1Q9GZK7 315 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 TMEM185BQ9H7F4 350 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 S100A14Q9HCY8 104 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 MEPEQ9NQ76 525 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 C8orf4Q9NR00 106 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 EMC3Q9P0I2 261 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 STX18Q9P2W9 335 aaKnown RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 CLCF1Q9UBD9 225 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF629Q9UEG4 869 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 ENOPH1Q9UHY7 261 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 MGAT4BQ9UQ53 548 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 OSGIN2Q9Y236 505 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 SAMHD1Q9Y3Z3 626 aaKnown RBP4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FAM215AQ9Y5M1 114 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 NOX1Q9Y5S8 564 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FLNCQ14315 2725 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 FREM1Q5H8C1 2179 aa4.87□□□□□ -1.63
HMGB1P44-201ENST00000508597 USP9XQ93008 2570 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 A0A1W2PNV4 684 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 ENO4A6NNW6 628 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 EFCAB9A8MZ26 197 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 CENPBD1B2RD01 187 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 J3QKU1 62 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 CCL21O00585 134 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 OR10H3O60404 316 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 SS18L1O75177 396 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 E2F6O75461 281 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 DIRAS1O95057 198 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 CH25HO95992 272 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 PLGP00747 810 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 ADAP00813 363 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 YES1P07947 543 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 TSPAN19P0C672 248 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 SAGP10523 405 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 IFI30P13284 250 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 ZNF43P17038 809 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 BTF3P20290 206 aaKnown RBP4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 GNLYP22749 145 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 FPR3P25089 353 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 SHC1P29353 583 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 OPRM1P35372 400 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 RPS5P46782 204 aaKnown RBP4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 OMPP47874 163 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 GSSP48637 474 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 PCYT1AP49585 367 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 PUDPQ08623 228 aa4.86□□□□□ -1.63
HMGB1P44-201ENST00000508597 RASGEF1BQ0VAM2 473 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms