RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TEX13CA0A0J9YWL9 993 aa8□□□□□ -1.13
NUP54-207ENST00000508583 A0A1W2PPZ6 126 aa8□□□□□ -1.13
NUP54-207ENST00000508583 DEFB108AA8MXU0 73 aa8□□□□□ -1.13
NUP54-207ENST00000508583 G3V2T6 193 aa8□□□□□ -1.13
NUP54-207ENST00000508583 H3BN98 237 aa8□□□□□ -1.13
NUP54-207ENST00000508583 SOCS2O14508 198 aa8□□□□□ -1.13
NUP54-207ENST00000508583 RAB36O95755 333 aa8□□□□□ -1.13
NUP54-207ENST00000508583 ZNF23P17027 643 aa8□□□□□ -1.13
NUP54-207ENST00000508583 PCBD1P61457 104 aa8□□□□□ -1.13
NUP54-207ENST00000508583 MRPS34P82930 218 aaKnown RBP8□□□□□ -1.13
NUP54-207ENST00000508583 GSG1Q2KHT4 349 aa8□□□□□ -1.13
NUP54-207ENST00000508583 HIKESHIQ53FT3 197 aa8□□□□□ -1.13
NUP54-207ENST00000508583 NCMAPQ5T1S8 102 aa8□□□□□ -1.13
NUP54-207ENST00000508583 TMEM53Q6P2H8 277 aa8□□□□□ -1.13
NUP54-207ENST00000508583 LRFN4Q6PJG9 635 aa8□□□□□ -1.13
NUP54-207ENST00000508583 THSD4Q6ZMP0 1018 aa8□□□□□ -1.13
NUP54-207ENST00000508583 LINGO2Q7L985 606 aa8□□□□□ -1.13
NUP54-207ENST00000508583 SLC22A24Q8N4F4 322 aa8□□□□□ -1.13
NUP54-207ENST00000508583 HDAC2Q92769 488 aaKnown RBP8□□□□□ -1.13
NUP54-207ENST00000508583 UTP4Q969X6 686 aaKnown RBP8□□□□□ -1.13
NUP54-207ENST00000508583 CENPNQ96H22 339 aaPredicted RBP8□□□□□ -1.13
NUP54-207ENST00000508583 SAMD8Q96LT4 415 aa8□□□□□ -1.13
NUP54-207ENST00000508583 Q96M85 177 aa8□□□□□ -1.13
NUP54-207ENST00000508583 GPA33Q99795 319 aa8□□□□□ -1.13
NUP54-207ENST00000508583 WACQ9BTA9 647 aa8□□□□□ -1.13
NUP54-207ENST00000508583 C1orf198Q9H425 327 aa8□□□□□ -1.13
NUP54-207ENST00000508583 SIAEQ9HAT2 523 aa8□□□□□ -1.13
NUP54-207ENST00000508583 FAIMQ9NVQ4 179 aa8□□□□□ -1.13
NUP54-207ENST00000508583 TMEM38BQ9NVV0 291 aa8□□□□□ -1.13
NUP54-207ENST00000508583 VNN3Q9NY84 501 aa8□□□□□ -1.13
NUP54-207ENST00000508583 ADAM18Q9Y3Q7 739 aa8□□□□□ -1.13
NUP54-207ENST00000508583 SLC22A23A1A5C7 686 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 RIIAD1A6NNX1 92 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 VSTM5A8MXK1 200 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 M0R1B8 84 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 TMCC2O75069 709 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 KHDRBS3O75525 346 aaKnown RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 PPP1R3DO95685 299 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 CRYAAP02489 173 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 CD79AP11912 226 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 OSMP13725 252 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PRF1P14222 555 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 B4GALT1P15291 398 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 CBR1P16152 277 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 ZNF26P17031 533 aaPredicted RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 ZNF3P17036 446 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PAICSP22234 425 aaKnown RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 CD40P25942 277 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PTDSS1P48651 473 aaKnown RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 ZNF83P51522 516 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 FOXG1P55316 489 aaPredicted RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 GLO1Q04760 184 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PLP2Q04941 152 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 RUNX1T1Q06455 604 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 BSPH1Q075Z2 132 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PPP1R8Q12972 351 aaKnown RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 MESTQ5EB52 335 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 CLEC12AQ5QGZ9 265 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PHYHD1Q5SRE7 291 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 SLC27A4Q6P1M0 643 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 SLC25A47Q6Q0C1 308 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 SEZ6L2Q6UXD5 910 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 C20orf204Q6ZNR8 217 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 SLC16A14Q7RTX9 510 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 CDC20BQ86Y33 519 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 GLB1L2Q8IW92 636 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PARP8Q8N3A8 854 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 LNX2Q8N448 690 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 WDR31Q8NA23 367 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 NSMAFQ92636 917 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 NINJ1Q92982 152 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 NMD3Q96D46 503 aaKnown RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 SLC38A2Q96QD8 506 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 TSSK6Q9BXA6 273 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 SYT4Q9H2B2 425 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 NELFAQ9H3P2 528 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 CCNB1IP1Q9NPC3 277 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 PAPOLBQ9NRJ5 636 aaKnown RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 VSX1Q9NZR4 365 aaPredicted RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 CRNNQ9UBG3 495 aaPredicted RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 IL20RAQ9UHF4 553 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 KLHL21Q9UJP4 597 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 POU2F3Q9UKI9 436 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 ORC6Q9Y5N6 252 aa7.99□□□□□ -1.13
NUP54-207ENST00000508583 HRNRQ86YZ3 2850 aaPredicted RBP7.99□□□□□ -1.13
NUP54-207ENST00000508583 A0A1W2PPL8 197 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 C12orf71A8MTZ7 269 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 BHLHE40O14503 412 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 ABCD4O14678 606 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 SLC2A10O95528 541 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 IGKV3-15P01624 115 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 IGLV1-44P01699 117 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 HMGN1P05114 100 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 HIST1H1CP16403 213 aaKnown RBP7.98□□□□□ -1.13
NUP54-207ENST00000508583 MSR1P21757 451 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 CENPAP49450 140 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 BLVRAP53004 296 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 IST1P53990 364 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 FXYD6P3P58550 94 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 ESRRGP62508 458 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms