RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 OR4C6Q8NH72 309 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 UCN3Q969E3 161 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 POLR2J2Q9GZM3 115 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 POLR2J3Q9H1A7 115 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 C6orf203Q9P0P8 240 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 STOX2Q9P2F5 926 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 KMT2CQ8NEZ4 4911 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 RYR3Q15413 4870 aa2.88□□□□□ -1.95
TOPBP1-206ENST00000508524 TNRC6AQ8NDV7 1962 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 PRKDCP78527 4128 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 CITO14578 2027 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 IGLV4-60A0A075B6I1 120 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 IGHV3-64DA0A0J9YX35 117 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 ERICH2A1L162 156 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 FAM47DPA6NHR8 397 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 GFYI3L273 518 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 FCN1O00602 326 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 COCHO43405 550 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 FAM189A1O60320 539 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 ALPPL2P10696 532 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 LIPCP11150 499 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 OAS2P29728 719 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 CCR6P51684 374 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 RPS14P62263 151 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 SLC10A7Q0GE19 358 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 KLRB1Q12918 225 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 LAGE3Q14657 143 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 NDUFA9Q16795 377 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 LIPNQ5VXI9 398 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 FAM199XQ6PEV8 388 aaPredicted RBP2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 WASH2PQ6VEQ5 465 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 MTURNQ8N3F0 131 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 OR51G1Q8NGK1 321 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 SPPL2BQ8TCT7 592 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 FAM210BQ96KR6 192 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 TCEANC2Q96MN5 208 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 SMR3AQ99954 134 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 LHX5Q9H2C1 402 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 MTRF1LQ9UGC7 380 aaKnown RBP2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 FETUBQ9UGM5 382 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 PHF11Q9UIL8 331 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 DDX19BQ9UMR2 479 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 PTPRJQ12913 1337 aa2.87□□□□□ -1.95
TOPBP1-206ENST00000508524 CNTRLQ7Z7A1 2325 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 A0A096LNJ9 63 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 SYCE3A1L190 88 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 OR6C65A6NJZ3 312 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 H3BMQ9 156 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 LYPLA2O95372 231 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 COX7A1P24310 79 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 BDKRB1P46663 353 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 ARRB1P49407 418 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 PRPS1P60891 318 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 WASHC5Q12768 1159 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 CBX3Q13185 183 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 CHI3L2Q15782 390 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 NADK2Q4G0N4 442 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 CCDC40Q4G0X9 1142 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 TPRG1LQ5T0D9 272 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 TPGS1Q6ZTW0 290 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 EFL1Q7Z2Z2 1120 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 DAW1Q8N136 415 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 CNIH3Q8TBE1 160 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 PIGCQ92535 297 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 TMEM186Q96B77 213 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 C19orf60Q96EN9 201 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 MS4A14Q96JA4 679 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 NSMCE2Q96MF7 247 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 OR5B2Q96R09 309 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 OR2M2Q96R28 347 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 SLC30A2Q9BRI3 323 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 CCDC94Q9BW85 323 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 BBS2Q9BXC9 721 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 RSPO3Q9BXY4 272 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 XPO4Q9C0E2 1151 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 PRSS16Q9NQE7 514 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 MRPL39Q9NYK5 338 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 PISDQ9UG56 409 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 AP4B1Q9Y6B7 739 aa2.86□□□□□ -1.95
TOPBP1-206ENST00000508524 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 A0A0G2JRQ6 117 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 SULT2B1O00204 365 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 PES1O00541 588 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 PIRO00625 290 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 SLC9A3R1O14745 358 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 NVLO15381 856 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 YKT6O15498 198 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 BCAS2O75934 225 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 GP1BAP07359 652 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 MCF2P10911 925 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 CYLC1P35663 651 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 NAMPTP43490 491 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 GABPB1Q06547 395 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 TRDNQ13061 729 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 ARFRP1Q13795 201 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 DEFB109BQ30KR1 87 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 ADPRMQ3LIE5 342 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 RABGAP1LQ5R372 815 aa2.85□□□□□ -1.95
TOPBP1-206ENST00000508524 COX15Q7KZN9 410 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms