RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SLC22A23A1A5C7 686 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 H7C1Q1 480 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 hCG_2039718K7EN88 272 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 GADD45GO95257 159 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 CD14P08571 375 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 CELA3BP08861 270 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 CSF3P09919 207 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 CALCRP30988 508 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 RPL4P36578 427 aaKnown RBP17.23■□□□□ 0.35
SFXN1-209ENST00000508290 GPR4P46093 362 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 LIMS1P48059 325 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 NUDT6P53370 316 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 LSM11P83369 360 aaKnown RBP eCLIP17.23■□□□□ 0.35
SFXN1-209ENST00000508290 GALK2Q01415 458 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 RUNX1T1Q06455 604 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 ADIPOQQ15848 244 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 GPR139Q6DWJ6 353 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 FAM86B1Q8N7N1 296 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 ARIH2OSQ8N7S6 290 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 OR4K5Q8NGD3 323 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF519Q8TB69 540 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 NMD3Q96D46 503 aaKnown RBP17.23■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF75AQ96N20 296 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 WACQ9BTA9 647 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 NOX3Q9HBY0 568 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 GRHPRQ9UBQ7 328 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF346Q9UL40 294 aaKnown RBP17.23■□□□□ 0.35
SFXN1-209ENST00000508290 AURKCQ9UQB9 309 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 FKBP7Q9Y680 259 aa17.23■□□□□ 0.35
SFXN1-209ENST00000508290 PLCE1Q9P212 2302 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 XKRYO14609 159 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 CDC42EP2O14613 210 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 KRT36O76013 467 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 NDUFB2O95178 105 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 ERCC1P07992 297 aaPredicted RBP17.22■□□□□ 0.35
SFXN1-209ENST00000508290 OR4A8P0C604 315 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 NR4A1P22736 598 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 ACVR1BP36896 505 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 EFNA4P52798 201 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 HGFACQ04756 655 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 PLP2Q04941 152 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 PIGFQ07326 219 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 TOP3AQ13472 1001 aaPredicted RBP17.22■□□□□ 0.35
SFXN1-209ENST00000508290 FHL1Q13642 323 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 DAG1Q14118 895 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 IQCCQ4KMZ1 466 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 TBPL2Q6SJ96 375 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 DNM1P46Q6ZS02 220 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 LINC00471Q8N535 108 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 OR1J2Q8NGS2 313 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 HDAC2Q92769 488 aaKnown RBP17.22■□□□□ 0.35
SFXN1-209ENST00000508290 FBXO17Q96EF6 278 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 GPX7Q96SL4 187 aaPredicted RBP17.22■□□□□ 0.35
SFXN1-209ENST00000508290 LRMDAQ9H2I8 198 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 PLK3Q9H4B4 646 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 SLC7A8Q9UHI5 535 aa17.22■□□□□ 0.35
SFXN1-209ENST00000508290 SH3PXD2BA1X283 911 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 TRIM64A6NGJ6 449 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 TRIM64BA6NI03 449 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 STAMBPO95630 424 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF35P13682 527 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 HOXB6P17509 224 aaKnown RBP17.21■□□□□ 0.35
SFXN1-209ENST00000508290 FUT4P22083 530 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 GLRXP35754 106 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 OMPP47874 163 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 EVX1P49640 407 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 PPOXP50336 477 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 SPIBQ01892 262 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 SNTB2Q13425 540 aaKnown RBP17.21■□□□□ 0.35
SFXN1-209ENST00000508290 MST1LQ2TV78 715 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 CLEC2AQ6UVW9 174 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 MYPOPQ86VE0 399 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-209ENST00000508290 FAM46AQ96IP4 442 aaKnown RBP17.21■□□□□ 0.35
SFXN1-209ENST00000508290 TSPAN32Q96QS1 320 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 RHNO1Q9BSD3 238 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 FUZQ9BT04 418 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 MAGIXQ9H6Y5 334 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 RNF121Q9H920 327 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 SEC61A2Q9H9S3 476 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 MYOZ1Q9NP98 299 aaPredicted RBP17.21■□□□□ 0.35
SFXN1-209ENST00000508290 TMCC3Q9ULS5 477 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 SIGLEC7Q9Y286 467 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 CMAHPQ9Y471 501 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 V9GYQ6 96 aa17.21■□□□□ 0.35
SFXN1-209ENST00000508290 USF3Q68DE3 2245 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 TRBV4-1A0A0J9YWV2 114 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 IQCMA0A1B0GVH7 501 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 SNAP29O95721 258 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 HEXAP06865 529 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 APEHP13798 732 aaKnown RBP17.2■□□□□ 0.34
SFXN1-209ENST00000508290 MSX2P35548 267 aaPredicted RBP17.2■□□□□ 0.34
SFXN1-209ENST00000508290 MYBPC1Q00872 1141 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 TRIM25Q14258 630 aaKnown RBP17.2■□□□□ 0.34
SFXN1-209ENST00000508290 FAM27BQ5VT28 67 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 LCN8Q6JVE9 175 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 SLC25A47Q6Q0C1 308 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 CLEC9AQ6UXN8 241 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 UNQ6126/PRO20091Q6UXV3 157 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 ADCK1Q86TW2 530 aa17.2■□□□□ 0.34
SFXN1-209ENST00000508290 ZDHHC21Q8IVQ6 265 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms