RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CT45A2Q5DJT8 189 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 TMEM205Q6UW68 189 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 C12orf45Q8N5I9 185 aaPredicted RBP12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 PLPP7Q8NBV4 271 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 OR1J2Q8NGS2 313 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 C4orf45Q96LM5 186 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 LPAR4Q99677 370 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 TWSG1Q9GZX9 223 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 C1orf198Q9H425 327 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 TMEM185BQ9H7F4 350 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 KCNG2Q9UJ96 466 aa12.16□□□□□ -0.46
SNCAIP-209ENST00000508017 TMEM82A0PJX8 343 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 TMEM212A6NML5 194 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 CCSO14618 274 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 ALOX12BO75342 701 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 TPPPO94811 219 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 APODP05090 189 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 UBBP0CG47 229 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 UBCP0CG48 685 aaKnown RBP12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 MGMTP16455 207 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 RPS27AP62979 156 aaKnown RBP12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 UBA52P62987 128 aaKnown RBP12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 EIF2B5Q13144 721 aaKnown RBP12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 CD226Q15762 336 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 RAB11BQ15907 218 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 LRRC37A5PQ49AS3 106 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 BEST3Q8N1M1 668 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 CLRN3Q8NCR9 226 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 GPX8Q8TED1 209 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 PAWRQ96IZ0 340 aaKnown RBP12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 PTDSS2Q9BVG9 487 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 SYT4Q9H2B2 425 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 IL23AQ9NPF7 189 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 PCDHB16Q9NRJ7 776 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 TAS2R3Q9NYW6 316 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 SLC22A13Q9Y226 551 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 OR10H1Q9Y4A9 318 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 KNL1Q8NG31 2342 aa12.15□□□□□ -0.46
SNCAIP-209ENST00000508017 CDC40O60508 579 aaKnown RBP eCLIP12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 SRPX2O60687 465 aaPredicted RBP12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 LUMP51884 338 aaPredicted RBP12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 SCAND1P57086 179 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 MC2RQ01718 297 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 EGR4Q05215 589 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 CBLN3Q6UW01 205 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 MCATQ8IVS2 390 aaKnown RBP12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 RSC1A1Q92681 617 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 ZMAT3Q9HA38 289 aaKnown RBP12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 Q9N2J8 555 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 MMP25Q9NPA2 562 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 MYEF2Q9P2K5 600 aaKnown RBP12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 GRHPRQ9UBQ7 328 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 GTF2A1LQ9UNN4 478 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 PLCL2Q9UPR0 1127 aa12.15□□□□□ -0.47
SNCAIP-209ENST00000508017 LOC100289279A0A1B0GTE1 492 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 GMFGO60234 142 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 RAB3DO95716 219 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 IFI6P09912 130 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 BTG2P78543 158 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 NFATC4Q14934 902 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 ATXN7L3Q14CW9 347 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 JMJD6Q6NYC1 403 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 ATG4DQ86TL0 474 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 C16orf52Q8NHV5 167 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 SEH1LQ96EE3 360 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 KTI12Q96EK9 354 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 NARS2Q96I59 477 aaKnown RBP12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 CCDC3Q9BQI4 270 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 ERVK-19Q9WJR5 959 aa12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 RANBP2P49792 3224 aaKnown RBP12.14□□□□□ -0.47
SNCAIP-209ENST00000508017 A0A0A6YYC8 382 aaPredicted RBP12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 OR5H14A6NHG9 310 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 I3L1I5 382 aaPredicted RBP12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 ZNF432O94892 652 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 PMS2P2O95744 297 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 AMY2AP04746 511 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 ASAH2BP0C7U1 165 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 ATPAF1Q5TC12 328 aaPredicted RBP12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 ZNF627Q7L945 461 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 PM20D2Q8IYS1 436 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 LINC00518Q8N0U6 118 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 WDR92Q96MX6 357 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 INTS14Q96SY0 518 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 G6PC3Q9BUM1 346 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 SLC19A3Q9BZV2 496 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 HRASLS2Q9NWW9 162 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 GDE1Q9NZC3 331 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 SZT2Q5T011 3432 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 F5P12259 2224 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 SLC17A2O00624 439 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 APBB3O95704 486 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 PNPP00491 289 aa12.13□□□□□ -0.47
SNCAIP-209ENST00000508017 CSN2P05814 226 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms