RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 FAF2Q96CS3 445 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 NSL1Q96IY1 281 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF597Q96LX8 424 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 MBOAT7Q96N66 472 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 SERPINB12Q96P63 405 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 APOL4Q9BPW4 351 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 PSD2Q9BQI7 771 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 APOOQ9BUR5 198 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TIPINQ9BVW5 301 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 KIFC1Q9BW19 673 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 GATA5Q9BWX5 397 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 VN1R1Q9GZP7 353 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 LAT2Q9GZY6 243 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ARL6Q9H0F7 186 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 PCBD2Q9H0N5 130 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 C11orf49Q9H6J7 331 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 GAREM1Q9H706 876 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 EXOSC4Q9NPD3 245 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 FGF21Q9NSA1 209 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 DCAF13Q9NV06 445 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 RMND1Q9NWS8 449 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 GIN1Q9NXP7 522 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TECRQ9NZ01 308 aaKnown RBP3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 MAT2BQ9NZL9 334 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 FLRT3Q9NZU0 649 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF221Q9UK13 617 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 PSG11Q9UQ72 335 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC17A4Q9Y2C5 497 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 OARD1Q9Y530 152 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 CUL7Q14999 1698 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TAF1P21675 1872 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 MAP3K1Q13233 1512 aa3.13□□□□□ -1.91
HMGB3P15-201ENST00000507326 TNRQ92752 1358 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ABCC11Q96J66 1382 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 SAMD9Q5K651 1589 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 CLIP1P30622 1438 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 PRAG1Q86YV5 1406 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ARHGAP35Q9NRY4 1499 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 NSG1A0A0A6YYJ2 146 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 KIR2DS5A0A0G2JLQ3 304 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 GLYATL1P3A0A0U1RQE8 302 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 TSPAN11A1L157 253 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 EFCAB7A8K855 629 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 LYRM9A8MSI8 78 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 HACD1B0YJ81 288 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 H3BMH7 237 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 KIR2DS3K7RE56 304 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 M0QXV9 152 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 CDC7O00311 574 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 LAD1O00515 517 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF195O14628 629 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 PPP1R2P9O14990 202 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 B4GALT5O43286 388 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 CHP2O43745 196 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ALOX12BO75342 701 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 B3GAT3O94766 335 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 OXSR1O95747 527 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 LSM8O95777 96 aaKnown RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 TIMP1P01033 207 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 IGKV3-20P01619 116 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 CRYAAP02489 173 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 LINC00614P0C842 121 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 C8orf88P0DMB2 117 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 CHRNB1P11230 501 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 HLA-GP17693 338 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 C4BPBP20851 252 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 CALML3P27482 149 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 C21orf33P30042 268 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR1E1P30953 314 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ID1P41134 155 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 NSG1P42857 185 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 YAP1P46937 504 aaKnown RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 PRLHRP49683 370 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ACOT2P49753 483 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 CLDN20P56880 219 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 SEC61BP60468 96 aaKnown RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZP1P60852 638 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 FAM3AP98173 230 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 TNFRSF9Q07011 255 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF415Q09FC8 603 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ELAVL2Q12926 359 aaKnown RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 TPBGQ13641 420 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 TFDP2Q14188 446 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 NDUFA9Q16795 377 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 DGUOKQ16854 277 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 TTLL9Q3SXZ7 439 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC25A52Q3SY17 297 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 RFTN2Q52LD8 501 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 TP53I3Q53FA7 332 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 SOHLH1Q5JUK2 328 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 GFI1BQ5VTD9 330 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 PLPP4Q5VZY2 271 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 APOBEC3HQ6NTF7 200 aaKnown RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 RWDD4Q6NW29 188 aaKnown RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 ANKRD54Q6NXT1 300 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 STEAP1BQ6NZ63 245 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 FAHD2BQ6P2I3 314 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 EMBQ6PCB8 327 aa3.12□□□□□ -1.91
HMGB3P15-201ENST00000507326 PAQR6Q6TCH4 344 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms