RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ADA2Q9NZK5 511 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 THYN1Q9P016 225 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CCDC167Q9P0B6 97 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 STOX2Q9P2F5 926 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 MOSPD1Q9UJG1 213 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ANGPTL2Q9UKU9 493 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PSME2Q9UL46 239 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 KCNK6Q9Y257 313 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 FOXA2Q9Y261 457 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ITM2BQ9Y287 266 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 FIS1Q9Y3D6 152 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 L3MBTL1Q9Y468 752 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TIMM22Q9Y584 194 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR1A2Q9Y585 309 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TET1Q8NFU7 2136 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TTC28Q96AY4 2481 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 MYO16Q9Y6X6 1858 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 KCNE1BA0A087WTH5 132 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 SPTY2D1-AS1A0A0U1RR47 76 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 GNG14A0A1W2PPG7 69 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 SH3PXD2BA1X283 911 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 EVPLLA8MZ36 301 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 C2orf74A8MZ97 194 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ANKRD65E5RJM6 399 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 E7EQ34 232 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TLR4O00206 839 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 RFXANKO14593 260 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 CCSO14618 274 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 MRASO14807 208 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 NVLO15381 856 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TXNL1O43396 289 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF354AO60765 605 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 EEDO75530 441 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 SEMA3DO95025 777 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ANP32DO95626 131 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ATP6V1G2O95670 118 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 PDYNP01213 254 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 IFNA14P01570 189 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ANXA4P09525 319 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 CCDC159P0C7I6 412 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 UMPSP11172 480 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ERGP11308 486 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 HSD17B1P14061 328 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 XRCC1P18887 633 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TSPAN8P19075 237 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 IL10P22301 178 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 IMPA1P29218 277 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 PBLDP30039 288 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 MAT2AP31153 395 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 S100A3P33764 101 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 CA5AP35218 305 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 GCKP35557 465 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 HPCAL1P37235 193 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ACTR1BP42025 376 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 MAGEA8P43361 318 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TRPC1P48995 793 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ARRB1P49407 418 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ARHGDIAP52565 204 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 HNRNPFP52597 415 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 METAP1P53582 386 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 MTTPP55157 894 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 FOXA1P55317 472 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 CLDN8P56748 225 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 C21orf59P57076 290 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ACTR1AP61163 376 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 PSME3P61289 254 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 RPL27P61353 136 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 STXBP1P61764 594 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TBPL1P62380 186 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TRA2BP62995 288 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 RPL38P63173 70 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ZFP36L1Q07352 338 aaKnown RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF763Q0D2J5 394 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TSTA3Q13630 321 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 DOC2AQ14183 400 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 FLOT2Q14254 428 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 GNA13Q14344 377 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 GK2Q14410 553 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 GRB7Q14451 532 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ECSCRQ19T08 205 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 C15orf32Q32M92 178 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 RNF212Q495C1 297 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 VPS26BQ4G0F5 336 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF658BQ4V348 819 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 PIGGQ5H8A4 983 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 C9orf66Q5T8R8 295 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 CPTPQ5TA50 214 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 WDR25Q64LD2 544 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 NOXRED1Q6NXP6 359 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 TRIM40Q6P9F5 258 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 IYDQ6PHW0 289 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 CD164L2Q6UWJ8 174 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 MBOAT1Q6ZNC8 495 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 RABEPKQ7Z6M1 372 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC25A42Q86VD7 318 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 PARGQ86W56 976 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 OOSP2Q86WS3 158 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 DHFR2Q86XF0 187 aa2.01□□□□□ -2.09
TOPBP1-205ENST00000506779 GKN2Q86XP6 184 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms