RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 VMACQ2NL98 169 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 MMEL1Q495T6 779 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 REP15Q6BDI9 236 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 RGS7BPQ6MZT1 257 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 FAHD2BQ6P2I3 314 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 NHLRC1Q6VVB1 395 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 SLC16A14Q7RTX9 510 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 SLC30A7Q8NEW0 376 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 OR4K5Q8NGD3 323 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 FGFBP3Q8TAT2 258 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 FAHD2AQ96GK7 314 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 ZNF75AQ96N20 296 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 SLC19A3Q9BZV2 496 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 ZNF385DQ9H6B1 395 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 TMEM38BQ9NVV0 291 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 MYEF2Q9P2K5 600 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 SH3GLB1Q9Y371 365 aa13.72□□□□□ -0.21
PDLIM7-213ENST00000505074 TRRAPQ9Y4A5 3859 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 SHOX2O60902 331 aaPredicted RBP13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 LYPD3O95274 346 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 HPXP02790 462 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 F13BP05160 661 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 LCKP06239 509 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 PGA4P0DJD7 388 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 PGA3P0DJD8 388 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 NAT2P11245 290 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 CCL2P13500 99 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 SLC36A2Q495M3 483 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 ELFN2Q5R3F8 820 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 HDXQ7Z353 690 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 TSPYL5Q86VY4 417 aaPredicted RBP13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 CARM1Q86X55 608 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 ZNF584Q8IVC4 421 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 SYT14Q8NB59 555 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 OR51F2Q8NH61 342 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 CLDND2Q8NHS1 167 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 TSPEARQ8WU66 669 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 SNX33Q8WV41 574 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 STON2Q8WXE9 905 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 ECSITQ9BQ95 431 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 SIKE1Q9BRV8 207 aa13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 ZNF346Q9UL40 294 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-213ENST00000505074 IQCMA0A1B0GVH7 501 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 SLC22A23A1A5C7 686 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 PPIHO43447 177 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 EDF1O60869 148 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 PNPP00491 289 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 TFP02787 698 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 ASAH2BP0C7U1 165 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 HKR1P10072 659 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 SAGP10523 405 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 TNFRSF1BP20333 461 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 PLP2Q04941 152 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 SF3A3Q12874 501 aaKnown RBP eCLIP13.7□□□□□ -0.229e-8■■■■■ 56.8
PDLIM7-213ENST00000505074 FXNQ16595 210 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 TBC1D28Q2M2D7 210 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 LRFN4Q6PJG9 635 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 LRRC18Q8N456 261 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 RBM15BQ8NDT2 890 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 NOXO1Q8NFA2 376 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 PFN4Q8NHR9 129 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 RDH5Q92781 318 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 ZNF347Q96SE7 839 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 SH3GL1Q99961 368 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 TMEM120AQ9BXJ8 343 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 LRMDAQ9H2I8 198 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 ARGLU1Q9NWB6 273 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 TAAR3PQ9P1P4 343 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 GPR160Q9UJ42 338 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 BAG5Q9UL15 447 aa13.7□□□□□ -0.22
PDLIM7-213ENST00000505074 LOC105371242A0A075B767 164 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 TRAV20A0A0B4J274 112 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 TPD52L2O43399 206 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 PTHP01270 115 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 MT-ND1P03886 318 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 FUT1P19526 365 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 ACHEP22303 614 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 COL8A2P25067 703 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 DAP3P51398 398 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 UGT2B15P54855 530 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 KLF3P57682 345 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 HSF2Q03933 536 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 RPL18Q07020 188 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 RABL3Q5HYI8 236 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 NANOGP8Q6NSW7 305 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 TMEM154Q6P9G4 183 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 DPPA2Q7Z7J5 298 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 ZDHHC22Q8N966 263 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 OR1J2Q8NGS2 313 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 TMEM255BQ8WV15 326 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 MCHR2Q969V1 340 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 SGTBQ96EQ0 304 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 PRSS27Q9BQR3 290 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 PCDHAC1Q9H158 963 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 KCNN2Q9H2S1 579 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 NANOGQ9H9S0 305 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 MEPEQ9NQ76 525 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 INIPQ9NRY2 104 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms