RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZNF587Q96SQ5 575 aaPredicted RBP10.35□□□□□ -0.75
LSM6-204ENST00000504181 SLC19A3Q9BZV2 496 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 OR2J1Q9GZK6 312 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 SEMA6AQ9H2E6 1030 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 LRMDAQ9H2I8 198 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 C1orf198Q9H425 327 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 TMEM216Q9P0N5 145 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 CLN8Q9UBY8 286 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 STARD9Q9P2P6 4700 aa10.35□□□□□ -0.75
LSM6-204ENST00000504181 IQCMA0A1B0GVH7 501 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 ZNF879B4DU55 563 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 C22orf46C9J442 243 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 RAD51CO43502 376 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 ENSAO43768 121 aaKnown RBP10.34□□□□□ -0.75
LSM6-204ENST00000504181 FBXO24O75426 580 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 F13BP05160 661 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 GUSBP08236 651 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 CD28P10747 220 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 MMP9P14780 707 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 TNFRSF1AP19438 455 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
LSM6-204ENST00000504181 LIPAP38571 399 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 HPCAP84074 193 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 ZMAT1Q5H9K5 638 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 WBP2NLQ6ICG8 309 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 SLC22A9Q8IVM8 553 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 UEVLDQ8IX04 471 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 KLF14Q8TD94 323 aaPredicted RBP10.34□□□□□ -0.75
LSM6-204ENST00000504181 STK35Q8TDR2 534 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 TXNDC15Q96J42 360 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 SAMD8Q96LT4 415 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 TMEM246Q9BRR3 403 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 ATAD3AQ9NVI7 634 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 ZNRD1Q9P1U0 126 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 CGGBP1Q9UFW8 167 aaPredicted RBP10.34□□□□□ -0.75
LSM6-204ENST00000504181 RPUSD1Q9UJJ7 312 aaKnown RBP10.34□□□□□ -0.75
LSM6-204ENST00000504181 PPP2R2CQ9Y2T4 447 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 FAM96BQ9Y3D0 163 aa10.34□□□□□ -0.75
LSM6-204ENST00000504181 AGR2O95994 175 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 HPRP00739 348 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 PTHP01270 115 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 INHBAP08476 426 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 TNFSF4P23510 183 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 SLC6A2P23975 617 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 MAPK1P28482 360 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 EPHA3P29320 983 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 APLNRP35414 380 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 RPL3P39023 403 aaKnown RBP10.33□□□□□ -0.76
LSM6-204ENST00000504181 MMP16P51512 607 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 PLTPP55058 493 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 EGR4Q05215 589 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 C2orf54Q08AI8 447 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 RUNDC3AQ59EK9 446 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 MBNL2Q5VZF2 373 aaKnown RBP10.33□□□□□ -0.76
LSM6-204ENST00000504181 WDR25Q64LD2 544 aaPredicted RBP10.33□□□□□ -0.76
LSM6-204ENST00000504181 C11orf88Q6PI97 169 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 NLRC3Q7RTR2 1065 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 VPS37AQ8NEZ2 397 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 OR2Z1Q8NG97 314 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 RBMXL1Q96E39 390 aaKnown RBP10.33□□□□□ -0.76
LSM6-204ENST00000504181 WDFY2Q96P53 400 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 DPY30Q9C005 99 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 A4GALTQ9NPC4 353 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 RLIMQ9NVW2 624 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 NKX1-2Q9UD57 310 aaPredicted RBP10.33□□□□□ -0.76
LSM6-204ENST00000504181 FIS1Q9Y3D6 152 aa10.33□□□□□ -0.76
LSM6-204ENST00000504181 A0A096LPI6 279 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 ADARB2-AS1A8MUL3 147 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 LSM1O15116 133 aaKnown RBP10.32□□□□□ -0.76
LSM6-204ENST00000504181 TIMM8AO60220 97 aaPredicted RBP10.32□□□□□ -0.76
LSM6-204ENST00000504181 CYB5R3P00387 301 aaPredicted RBP10.32□□□□□ -0.76
LSM6-204ENST00000504181 IL7RP16871 459 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 CPT2P23786 658 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 GRPRP30550 384 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 WNT5AP41221 380 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 ACAA2P42765 397 aaKnown RBP10.32□□□□□ -0.76
LSM6-204ENST00000504181 COPZ1P61923 177 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 PLP2Q04941 152 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 COX10Q12887 443 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 PTGR1Q14914 329 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 XKR7Q5GH72 579 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 MTX3Q5HYI7 312 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 LYPD2Q6UXB3 125 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 CLECL1Q8IZS7 167 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 RBM15BQ8NDT2 890 aaKnown RBP10.32□□□□□ -0.76
LSM6-204ENST00000504181 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 OR2T6Q8NHC8 308 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 PPP1R35Q8TAP8 253 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 ZNF420Q8TAQ5 688 aaPredicted RBP10.32□□□□□ -0.76
LSM6-204ENST00000504181 FBXO25Q8TCJ0 367 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 MIPOL1Q8TD10 442 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 ERP44Q9BS26 406 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 PALMDQ9NP74 551 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 TMED5Q9Y3A6 229 aa10.32□□□□□ -0.76
LSM6-204ENST00000504181 ZNF726A6NNF4 738 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 MS4A18H0YCH9 400 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 PHYHO14832 338 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 OPN1SWP03999 348 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 FBP1P09467 338 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms