RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 IL32P24001 234 aa8.82□□□□□ -1
NUP54-203ENST00000504173 PEX2P28328 305 aa8.82□□□□□ -1
NUP54-203ENST00000504173 MPGP29372 298 aa8.82□□□□□ -1
NUP54-203ENST00000504173 ALDH3A2P51648 485 aa8.82□□□□□ -1
NUP54-203ENST00000504173 CRISP1P54107 249 aa8.82□□□□□ -1
NUP54-203ENST00000504173 RAD23AP54725 363 aa8.82□□□□□ -1
NUP54-203ENST00000504173 LCN6P62502 163 aa8.82□□□□□ -1
NUP54-203ENST00000504173 ESRRGP62508 458 aa8.82□□□□□ -1
NUP54-203ENST00000504173 MYBPC1Q00872 1141 aa8.82□□□□□ -1
NUP54-203ENST00000504173 TFF3Q07654 80 aa8.82□□□□□ -1
NUP54-203ENST00000504173 FAM27E3Q08E93 113 aa8.82□□□□□ -1
NUP54-203ENST00000504173 ITGADQ13349 1161 aa8.82□□□□□ -1
NUP54-203ENST00000504173 GINS1Q14691 196 aa8.82□□□□□ -1
NUP54-203ENST00000504173 P2RY6Q15077 328 aa8.82□□□□□ -1
NUP54-203ENST00000504173 TSC22D1Q15714 1073 aa8.82□□□□□ -1
NUP54-203ENST00000504173 PGGHGQ32M88 737 aa8.82□□□□□ -1
NUP54-203ENST00000504173 PHYHD1Q5SRE7 291 aa8.82□□□□□ -1
NUP54-203ENST00000504173 SLC35F1Q5T1Q4 408 aa8.82□□□□□ -1
NUP54-203ENST00000504173 LPCAT4Q643R3 524 aa8.82□□□□□ -1
NUP54-203ENST00000504173 LINGO2Q7L985 606 aa8.82□□□□□ -1
NUP54-203ENST00000504173 ADCK1Q86TW2 530 aa8.82□□□□□ -1
NUP54-203ENST00000504173 LNX2Q8N448 690 aa8.82□□□□□ -1
NUP54-203ENST00000504173 IQCF1Q8N6M8 205 aa8.82□□□□□ -1
NUP54-203ENST00000504173 OR4K13Q8NH42 304 aa8.82□□□□□ -1
NUP54-203ENST00000504173 FNDC8Q8TC99 324 aa8.82□□□□□ -1
NUP54-203ENST00000504173 KISS1RQ969F8 398 aaPredicted RBP8.82□□□□□ -1
NUP54-203ENST00000504173 KCNK17Q96T54 332 aa8.82□□□□□ -1
NUP54-203ENST00000504173 SMR3AQ99954 134 aa8.82□□□□□ -1
NUP54-203ENST00000504173 TEX12Q9BXU0 123 aa8.82□□□□□ -1
NUP54-203ENST00000504173 MRPL13Q9BYD1 178 aaKnown RBP8.82□□□□□ -1
NUP54-203ENST00000504173 RIBC2Q9H4K1 309 aa8.82□□□□□ -1
NUP54-203ENST00000504173 RNPEPL1Q9HAU8 725 aa8.82□□□□□ -1
NUP54-203ENST00000504173 CRLF2Q9HC73 371 aa8.82□□□□□ -1
NUP54-203ENST00000504173 GPR35Q9HC97 309 aa8.82□□□□□ -1
NUP54-203ENST00000504173 TAS2R16Q9NYV7 291 aa8.82□□□□□ -1
NUP54-203ENST00000504173 USE1Q9NZ43 259 aa8.82□□□□□ -1
NUP54-203ENST00000504173 NKX1-2Q9UD57 310 aaPredicted RBP8.82□□□□□ -1
NUP54-203ENST00000504173 TMEFF2Q9UIK5 374 aaPredicted RBP8.82□□□□□ -1
NUP54-203ENST00000504173 ANK2Q01484 3957 aa8.81□□□□□ -1
NUP54-203ENST00000504173 SLC22A23A1A5C7 686 aa8.81□□□□□ -1
NUP54-203ENST00000504173 PRSS37A4D1T9 235 aa8.81□□□□□ -1
NUP54-203ENST00000504173 RIIAD1A6NNX1 92 aa8.81□□□□□ -1
NUP54-203ENST00000504173 C16orf97H3BN30 126 aa8.81□□□□□ -1
NUP54-203ENST00000504173 RPL36A-HNRNPH2H7BZ11 118 aa8.81□□□□□ -1
NUP54-203ENST00000504173 AHCYL1O43865 530 aa8.81□□□□□ -1
NUP54-203ENST00000504173 MGRN1O60291 552 aa8.81□□□□□ -1
NUP54-203ENST00000504173 RAD51DO75771 328 aa8.81□□□□□ -1
NUP54-203ENST00000504173 RENP00797 406 aa8.81□□□□□ -1
NUP54-203ENST00000504173 IFNGP01579 166 aa8.81□□□□□ -1
NUP54-203ENST00000504173 ITGA5P08648 1049 aa8.81□□□□□ -1
NUP54-203ENST00000504173 QDPRP09417 244 aa8.81□□□□□ -1
NUP54-203ENST00000504173 HIST1H1CP16403 213 aaKnown RBP8.81□□□□□ -1
NUP54-203ENST00000504173 PSMB1P20618 241 aaKnown RBP8.81□□□□□ -1
NUP54-203ENST00000504173 GRK5P34947 590 aa8.81□□□□□ -1
NUP54-203ENST00000504173 UGT2B10P36537 528 aa8.81□□□□□ -1
NUP54-203ENST00000504173 CDKN2AP42771 156 aaKnown RBP8.81□□□□□ -1
NUP54-203ENST00000504173 FOXG1P55316 489 aaPredicted RBP8.81□□□□□ -1
NUP54-203ENST00000504173 SH3BGRP55822 239 aaPredicted RBP8.81□□□□□ -1
NUP54-203ENST00000504173 ADAM8P78325 824 aa8.81□□□□□ -1
NUP54-203ENST00000504173 TGFBR3Q03167 851 aa8.81□□□□□ -1
NUP54-203ENST00000504173 SLC34A1Q06495 639 aa8.81□□□□□ -1
NUP54-203ENST00000504173 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.81□□□□□ -1
NUP54-203ENST00000504173 LRRC36Q1X8D7 754 aa8.81□□□□□ -1
NUP54-203ENST00000504173 CEACAM16Q2WEN9 425 aa8.81□□□□□ -1
NUP54-203ENST00000504173 SFRP5Q5T4F7 317 aa8.81□□□□□ -1
NUP54-203ENST00000504173 LEG1Q6P5S2 330 aa8.81□□□□□ -1
NUP54-203ENST00000504173 CLEC9AQ6UXN8 241 aa8.81□□□□□ -1
NUP54-203ENST00000504173 STAC2Q6ZMT1 411 aa8.81□□□□□ -1
NUP54-203ENST00000504173 PTCHD4Q6ZW05 846 aa8.81□□□□□ -1
NUP54-203ENST00000504173 BHLHA15Q7RTS1 189 aaPredicted RBP8.81□□□□□ -1
NUP54-203ENST00000504173 ZNF433Q8N7K0 673 aaPredicted RBP8.81□□□□□ -1
NUP54-203ENST00000504173 SDR9C7Q8NEX9 313 aa8.81□□□□□ -1
NUP54-203ENST00000504173 STEAP2Q8NFT2 490 aa8.81□□□□□ -1
NUP54-203ENST00000504173 OR52E2Q8NGJ4 325 aa8.81□□□□□ -1
NUP54-203ENST00000504173 NSMAFQ92636 917 aa8.81□□□□□ -1
NUP54-203ENST00000504173 MCHR2Q969V1 340 aa8.81□□□□□ -1
NUP54-203ENST00000504173 C18orf12Q96KH6 178 aa8.81□□□□□ -1
NUP54-203ENST00000504173 RBP7Q96R05 134 aa8.81□□□□□ -1
NUP54-203ENST00000504173 SLC29A1Q99808 456 aa8.81□□□□□ -1
NUP54-203ENST00000504173 HDHD5Q9BXW7 423 aa8.81□□□□□ -1
NUP54-203ENST00000504173 ACTR6Q9GZN1 396 aa8.81□□□□□ -1
NUP54-203ENST00000504173 SLC25A19Q9HC21 320 aa8.81□□□□□ -1
NUP54-203ENST00000504173 NPDC1Q9NQX5 325 aaPredicted RBP8.81□□□□□ -1
NUP54-203ENST00000504173 KLHL21Q9UJP4 597 aa8.81□□□□□ -1
NUP54-203ENST00000504173 GPR52Q9Y2T5 361 aa8.81□□□□□ -1
NUP54-203ENST00000504173 FAM171A2A8MVW0 826 aa8.8□□□□□ -1
NUP54-203ENST00000504173 ZNF99A8MXY4 864 aaPredicted RBP8.8□□□□□ -1
NUP54-203ENST00000504173 CASQ2O14958 399 aaPredicted RBP8.8□□□□□ -1
NUP54-203ENST00000504173 DHHO43323 396 aa8.8□□□□□ -1
NUP54-203ENST00000504173 SEC14L2O76054 403 aa8.8□□□□□ -1
NUP54-203ENST00000504173 SLC2A10O95528 541 aa8.8□□□□□ -1
NUP54-203ENST00000504173 HMGN1P05114 100 aa8.8□□□□□ -1
NUP54-203ENST00000504173 ZNF3P17036 446 aa8.8□□□□□ -1
NUP54-203ENST00000504173 HOXC12P31275 282 aa8.8□□□□□ -1
NUP54-203ENST00000504173 CCKARP32238 428 aa8.8□□□□□ -1
NUP54-203ENST00000504173 GIPRP48546 466 aa8.8□□□□□ -1
NUP54-203ENST00000504173 PCYT1AP49585 367 aa8.8□□□□□ -1
NUP54-203ENST00000504173 ZNF84P51523 738 aa8.8□□□□□ -1
NUP54-203ENST00000504173 ARF1P84077 181 aaKnown RBP8.8□□□□□ -1
NUP54-203ENST00000504173 CDK5Q00535 292 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms