RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 RAB4BP61018 213 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 ACTA2P62736 377 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 ACTG2P63267 376 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 KRR1Q13601 381 aaKnown RBP10.46□□□□□ -0.73
USP46-204ENST00000503060 QPRTQ15274 297 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 GLYR1Q49A26 553 aaPredicted RBP10.46□□□□□ -0.73
USP46-204ENST00000503060 ZMAT1Q5H9K5 638 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 PHF19Q5T6S3 580 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 FAM69AQ5T7M9 428 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 RPTNQ6XPR3 784 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 PPP1R3BQ86XI6 285 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 EXD3Q8N9H8 876 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 OR6K6Q8NGW6 343 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 GPR119Q8TDV5 335 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 KIAA1143Q96AT1 154 aaPredicted RBP10.46□□□□□ -0.73
USP46-204ENST00000503060 DIRAS2Q96HU8 199 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 ATF6BQ99941 703 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 NEURL2Q9BR09 285 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 SEC22CQ9BRL7 303 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 APMAPQ9HDC9 416 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 DIABLOQ9NR28 239 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 OCIAD1Q9NX40 245 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 GRIP1Q9Y3R0 1128 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 PCDHGA5Q9Y5G8 931 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 WISP1O95388 367 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 DHFRP00374 187 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 SPNP16150 400 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 ACVR1BP36896 505 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 POLR2HP52434 150 aaKnown RBP10.46□□□□□ -0.74
USP46-204ENST00000503060 PPP3R1P63098 170 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 SIGLEC14Q08ET2 396 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 EMC4Q5J8M3 183 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 HES5Q5TA89 166 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 LINC01590Q5TEZ4 76 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 C1QL3Q5VWW1 255 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 FAM131AQ6UXB0 335 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 OVCH2Q7RTZ1 564 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 C1orf210Q8IVY1 113 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 NUBPLQ8TB37 319 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 ABHD4Q8TB40 342 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 DUSP19Q8WTR2 217 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 PELI1Q96FA3 418 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 PGLYRP3Q96LB9 341 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 WDR77Q9BQA1 342 aaPredicted RBP10.46□□□□□ -0.74
USP46-204ENST00000503060 PARD6GQ9BYG4 376 aaPredicted RBP10.46□□□□□ -0.74
USP46-204ENST00000503060 TAS2R10Q9NYW0 307 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 NCDNQ9UBB6 729 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 COMMD3Q9UBI1 195 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 COPS3Q9UNS2 423 aa10.46□□□□□ -0.74
USP46-204ENST00000503060 ADAMTS9Q9P2N4 1935 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 TMED7-TICAM2A0A0A6YYA0 188 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 FABP12A6NFH5 140 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 MAGEB4O15481 346 aaPredicted RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 OGG1O15527 345 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 ZNF354AO60765 605 aaPredicted RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 AZGP1P25311 298 aaKnown RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 SHC1P29353 583 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 LCN10Q6JVE6 187 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 C3orf33Q6P1S2 294 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 XKRXQ6PP77 449 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 LYPD4Q6UWN0 246 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 MISPQ8IVT2 679 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 SNX33Q8WV41 574 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 THRSPQ92748 146 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 TSPAN32Q96QS1 320 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 GFM1Q96RP9 751 aaKnown RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 SPSB2Q99619 263 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 ALG12Q9BV10 488 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 PPIL3Q9H2H8 161 aaKnown RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 MARCH7Q9H992 704 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 TMED7Q9Y3B3 224 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 TRBV11-1A0A0K0K1C0 115 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 TEX51A0A1B0GUA7 166 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 TMEM72A0PK05 275 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 MEX3AA1L020 520 aaKnown RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 FAM171A2A8MVW0 826 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 J3QW42 95 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 SUSD5O60279 629 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 CPNE3O75131 537 aaKnown RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 SLC25A12O75746 678 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 CDKN1BP46527 198 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 FBXW4P57775 412 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 HSF2Q03933 536 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 BAK1Q16611 211 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 MESTQ5EB52 335 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 GDPD3Q7L5L3 318 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 GRINAQ7Z429 371 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 CPEB2Q7Z5Q1 589 aaKnown RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 CEACAM19Q7Z692 300 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 KDF1Q8NAX2 398 aaPredicted RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 GHSRQ92847 366 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 TMCO6Q96DC7 493 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 MRPL48Q96GC5 212 aaKnown RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 PTDSS2Q9BVG9 487 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 MOKQ9UQ07 419 aa10.45□□□□□ -0.74
USP46-204ENST00000503060 KLF2Q9Y5W3 355 aaPredicted RBP10.45□□□□□ -0.74
USP46-204ENST00000503060 ASCC3Q8N3C0 2202 aaKnown RBP10.44□□□□□ -0.74
USP46-204ENST00000503060 HPGDSO60760 199 aa10.44□□□□□ -0.74
USP46-204ENST00000503060 NPIPB7O75200 414 aa10.44□□□□□ -0.74
USP46-204ENST00000503060 SC5DO75845 299 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms