RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 GLSO94925 669 aaPredicted RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 SPARCP09486 303 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 CFPP27918 469 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 SLC26A5P58743 744 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 ROM1Q03395 351 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 TMEM255AQ5JRV8 349 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 TEX30Q5JUR7 227 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 METTL11BQ5VVY1 283 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 KCTD18Q6PI47 426 aaPredicted RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 OR8K3Q8NH51 312 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 TMEM234Q8WY98 164 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 OR10A4Q9H209 315 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 UBE2ZQ9H832 354 aaPredicted RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 MRPL22Q9NWU5 206 aaKnown RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 SLC23A1Q9UHI7 598 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 SCP2D1Q9UJQ7 156 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 SRPK3Q9UPE1 567 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 FLVCR2Q9UPI3 526 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 COL5A1P20908 1838 aaPredicted RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 EYSQ5T1H1 3165 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 A0A1B0GUH1 482 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 HPXP02790 462 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 SYPP08247 313 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 CSRP1P21291 193 aaKnown RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 RNF4P78317 190 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 COL28A1Q2UY09 1125 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 DNM1P46Q6ZS02 220 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 KRT77Q7Z794 578 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 DNASE2BQ8WZ79 361 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 MS4A3Q96HJ5 214 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 FOXN4Q96NZ1 517 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 ZNF587Q96SQ5 575 aaPredicted RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 OR11A1Q9GZK7 315 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 TGIF2Q9GZN2 237 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 ZNF768Q9H5H4 540 aaKnown RBP14.93□□□□□ -0.02
VCAN-204ENST00000502527 FBXL3Q9UKT7 428 aa14.93□□□□□ -0.02
VCAN-204ENST00000502527 ERVH48-1M5A8F1 160 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 TSC22D2O75157 780 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 MYF5P13349 255 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 CTLA4P16410 223 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 CRABP1P29762 137 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 VEGFCP49767 419 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 ADAM8P78325 824 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 SHISA6Q6ZSJ9 500 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.92□□□□□ -0.02
VCAN-204ENST00000502527 ZNF454Q8N9F8 522 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 ZNF248Q8NDW4 579 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 ATOH1Q92858 354 aaPredicted RBP14.92□□□□□ -0.02
VCAN-204ENST00000502527 C8orf44Q96CB5 159 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 SLC7A5P2Q9GIP4 190 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 NOX3Q9HBY0 568 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 DLL4Q9NR61 685 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 CDV3Q9UKY7 258 aaKnown RBP14.92□□□□□ -0.02
VCAN-204ENST00000502527 NPTNQ9Y639 398 aa14.92□□□□□ -0.02
VCAN-204ENST00000502527 H0YC42 278 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 H3BSH0 61 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 ARPC1BO15143 372 aaKnown RBP14.91□□□□□ -0.02
VCAN-204ENST00000502527 TMIGD3P0DMS9 266 aaPredicted RBP14.91□□□□□ -0.02
VCAN-204ENST00000502527 PTHLHP12272 177 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 SDHBP21912 280 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 BCKDHBP21953 392 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 CCKBRP32239 447 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 GLO1Q04760 184 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 CAMK2DQ13557 499 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 ANKRD16Q6P6B7 361 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 COX15Q7KZN9 410 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 OR11H4Q8NGC9 324 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 OR6S1Q8NH40 331 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 STT3BQ8TCJ2 826 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 ZNF436Q9C0F3 470 aaPredicted RBP14.91□□□□□ -0.02
VCAN-204ENST00000502527 TTYH1Q9H313 450 aaPredicted RBP14.91□□□□□ -0.02
VCAN-204ENST00000502527 DIABLOQ9NR28 239 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 A6NIZ1 184 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 TTLL8A6PVC2 850 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 RBBP9O75884 186 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 DNASE1P24855 282 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 DCTDP32321 178 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 RIDAP52758 137 aaKnown RBP14.91□□□□□ -0.02
VCAN-204ENST00000502527 STARD6P59095 220 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 RAP1BP61224 184 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 RAP1AP62834 184 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 EIF2B1Q14232 305 aaKnown RBP14.91□□□□□ -0.02
VCAN-204ENST00000502527 OTPQ5XKR4 325 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 RHBDD2Q6NTF9 364 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 GLB1L2Q8IW92 636 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 SPEM1Q8N4L4 309 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 OR8H1Q8NGG4 311 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 ST8SIA1Q92185 356 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 NXPE2Q96DL1 559 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 MED30Q96HR3 178 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 SHDQ96IW2 340 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 NUDT22Q9BRQ3 303 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 SEMA4CQ9C0C4 833 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 SLC22A11Q9NSA0 550 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 GTF2A1LQ9UNN4 478 aa14.91□□□□□ -0.02
VCAN-204ENST00000502527 IGHV3-20A0A0C4DH32 117 aa14.9□□□□□ -0.02
VCAN-204ENST00000502527 ANKUB1A6NFN9 424 aa14.9□□□□□ -0.02
VCAN-204ENST00000502527 FTCDNL1E5RQL4 147 aa14.9□□□□□ -0.02
VCAN-204ENST00000502527 SOX1O00570 391 aaPredicted RBP14.9□□□□□ -0.02
VCAN-204ENST00000502527 ADAM10O14672 748 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms