RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 SMCHD1A6NHR9 2005 aa13.85□□□□□ -0.19
C4A-259ENST00000498271 NPIPA5A0A0B4J1W7 369 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 NPIPA7E9PJI5 369 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 LGI1O95970 557 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 NPIPA8P0DM63 369 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 RAD52P43351 418 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 SMAD4Q13485 552 aaKnown RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 RBM39Q14498 530 aaKnown RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 ZNF620Q6ZNG0 422 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 OR2AK2Q8NG84 335 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 SPACA1Q9HBV2 294 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 CHRNA9Q9UGM1 479 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 CSAG2Q9Y5P2 127 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 LRP5LA4QPB2 252 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 TBPP20226 339 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 PRICKLE2Q7Z3G6 844 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 BCDIN3DQ7Z5W3 292 aaKnown RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 SYS1Q8N2H4 156 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 OR2L13Q8N349 312 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 OR13C8Q8NGS7 320 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 GNPNAT1Q96EK6 184 aaPredicted RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 TOLLIPQ9H0E2 274 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 F5H5K5 113 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 KLK8O60259 260 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 HLA-DOBP13765 273 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 SNCAP37840 140 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 COL13A1Q5TAT6 717 aaPredicted RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 CST9LP1Q5W188 147 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 XAF1Q6GPH4 301 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 KIAA0907Q7Z7F0 614 aaPredicted RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 OR13C9Q8NGT0 318 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 BCL7CQ8WUZ0 217 aaPredicted RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 HINT2Q9BX68 163 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 SRPK3Q9UPE1 567 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 KITLGP21583 273 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 CD80P33681 288 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 MMP15P51511 669 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 ZNF611Q8N823 705 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 HSD17B11Q8NBQ5 300 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 CHST8Q9H2A9 424 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 A6NLC8 198 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 AIFM1O95831 613 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 IGHG1P01857 330 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 H2AFB1P0C5Y9 115 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 GJA4P35212 333 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 TMEM31Q5JXX7 168 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 CORO6Q6QEF8 472 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 LIMS2Q7Z4I7 341 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 DVL3Q92997 716 aaPredicted RBP13.84□□□□□ -0.19
C4A-259ENST00000498271 PLEKHA2Q9HB19 425 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 NGBQ9NPG2 151 aa13.84□□□□□ -0.19
C4A-259ENST00000498271 PRSS38A1L453 326 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 FXYD1O00168 92 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 LDB3O75112 727 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 TSPAN12O95859 305 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 FABP1P07148 127 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 TSFMP43897 325 aaKnown RBP13.83□□□□□ -0.2
C4A-259ENST00000498271 ZNF133P52736 654 aaPredicted RBP13.83□□□□□ -0.2
C4A-259ENST00000498271 RNF4P78317 190 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 ADIRFQ15847 76 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 MKXQ8IYA7 352 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 MFSD9Q8NBP5 474 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 TTC9Q92623 222 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 DAZAP1Q96EP5 407 aaKnown RBP13.83□□□□□ -0.2
C4A-259ENST00000498271 SDSLQ96GA7 329 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 SELENOIQ9C0D9 397 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 PPT2Q9UMR5 302 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 A0A0J9YY10 115 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 HSPB2A8KAH6 182 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 FAM227AF5H4B4 570 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 HPNP05981 417 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 SFTPDP35247 375 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 HSPB2Q16082 182 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 ATPAF1Q5TC12 328 aaPredicted RBP13.83□□□□□ -0.2
C4A-259ENST00000498271 PDXPQ96GD0 296 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 TEAD3Q99594 435 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 RBM24Q9BX46 236 aaKnown RBP13.83□□□□□ -0.2
C4A-259ENST00000498271 C1orf198Q9H425 327 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 EPHX3Q9H6B9 360 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 FN3KRPQ9HA64 309 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 ACOXLQ9NUZ1 547 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 SLC23A1Q9UHI7 598 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 ZNF28P17035 718 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 PAX6P26367 422 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 TEAD1P28347 426 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 CAMK2BQ13554 666 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 FAM71CQ8NEG0 241 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 TMEM18Q96B42 140 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 TMEM202A6NGA9 273 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 CEBPZOSA8MTT3 80 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 B4GALT3O60512 393 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 PEX11BO96011 259 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 MBP02144 154 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 CSNK1A1P48729 337 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 SQSTM1Q13501 440 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 NSDHLQ15738 373 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 MLF2Q15773 248 aaPredicted RBP13.83□□□□□ -0.2
C4A-259ENST00000498271 Q6ZSR6 202 aa13.83□□□□□ -0.2
C4A-259ENST00000498271 MRPL21Q7Z2W9 205 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms