RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 EMC3Q9P0I2 261 aa8.69□□□□□ -1.02
TCTN3-206ENST00000497399 PSORS1C1Q9UIG5 152 aa8.69□□□□□ -1.02
TCTN3-206ENST00000497399 FOXD3Q9UJU5 478 aaPredicted RBP8.69□□□□□ -1.02
TCTN3-206ENST00000497399 NCOA6Q14686 2063 aaPredicted RBP8.69□□□□□ -1.02
TCTN3-206ENST00000497399 POLEQ07864 2286 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 FIGNL2A6NMB9 653 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 FAM171A2A8MVW0 826 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 SLC16A7O60669 478 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 SLC19A2O60779 497 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 UPK3AO75631 287 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 GLCEO94923 617 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 GPANK1O95872 356 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 LYNP07948 512 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 ADRA2AP08913 450 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 HOXD4P09016 255 aaPredicted RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 DBTP11182 482 aaKnown RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 AGTR1P30556 359 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 GSTT1P30711 240 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 HTR1FP30939 366 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 CSNK1A1P48729 337 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 CLRN1P58418 232 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 CSNK2BP67870 215 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 SLC35A2P78381 396 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 PIGFQ07326 219 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 EIF2S3LQ2VIR3 472 aaKnown RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 KLHL12Q53G59 568 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 SLC35D3Q5M8T2 416 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 LYPD4Q6UWN0 246 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 B3GNT6Q6ZMB0 384 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 C3P1Q6ZMU1 363 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 LINGO2Q7L985 606 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 ATCAYQ86WG3 371 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 OR2T4Q8NH00 348 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 RFKQ969G6 155 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 MCHR2Q969V1 340 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 LGALS12Q96DT0 336 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 ZMYND19Q96E35 227 aaPredicted RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 RBP7Q96R05 134 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 SIGLEC11Q96RL6 698 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 RACGAP1Q9H0H5 632 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 TP63Q9H3D4 680 aaPredicted RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 ZNF696Q9H7X3 374 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 GLRX2Q9NS18 164 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 MRPS18AQ9NVS2 196 aaKnown RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 H2AFY2Q9P0M6 372 aaPredicted RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 MYRFQ9Y2G1 1151 aa8.68□□□□□ -1.02
TCTN3-206ENST00000497399 NOSIPQ9Y314 301 aaKnown RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 RPL36Q9Y3U8 105 aaKnown RBP8.68□□□□□ -1.02
TCTN3-206ENST00000497399 SLC22A31A6NKX4 558 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 PRRG2O14669 202 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 SLC43A1O75387 559 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 MRPL33O75394 65 aaKnown RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 KHDRBS3O75525 346 aaKnown RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 TNFAIP8O95379 198 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 RPSAP08865 295 aaKnown RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 HTR1AP08908 422 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 QDPRP09417 244 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 GLI4P10075 376 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 CRABP1P29762 137 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 CEACAM8P31997 349 aaPredicted RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 KIR2DL2P43627 348 aaPredicted RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 MTNR1AP48039 350 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 GABARAPL2P60520 117 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 RPS7P62081 194 aaKnown RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 MVKQ03426 396 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 RBPJQ06330 500 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 FOXF2Q12947 444 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 TMED1Q13445 227 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 KCTD21Q4G0X4 260 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 THEM4Q5T1C6 240 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 C10orf128Q5T292 105 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 TSPO2Q5TGU0 170 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 OR2A2Q6IF42 318 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 AHSA2Q719I0 299 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 FAM214BQ7L5A3 538 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 CSMD2Q7Z408 3487 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 GCNT2Q8N0V5 402 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 ZNF511Q8NB15 262 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 NAXEQ8NCW5 288 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 ZNF540Q8NDQ6 660 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 PROKR2Q8NFJ6 384 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 OR6N1Q8NGY5 312 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 FNDC8Q8TC99 324 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 SSC4DQ8WTU2 575 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 INTS12Q96CB8 462 aaKnown RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 ZNF837Q96EG3 531 aaPredicted RBP8.67□□□□□ -1.02
TCTN3-206ENST00000497399 RNFT2Q96EX2 444 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 FOXN4Q96NZ1 517 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 TM9SF2Q99805 663 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 TTYH2Q9BSA4 534 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 LINC00470Q9BZP3 86 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 RERGLQ9H628 205 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 MARCH7Q9H992 704 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 SLC7A10Q9NS82 523 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 PARPBPQ9NWS1 579 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 SCN3BQ9NY72 215 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 HAO2Q9NYQ3 351 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 ERVK-18Q9QC07 812 aa8.67□□□□□ -1.02
TCTN3-206ENST00000497399 WARS2Q9UGM6 360 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms