RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 ART1P52961 327 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 RAP1BP61224 184 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 RAP1AP62834 184 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 TSPAN31Q12999 210 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 KRR1Q13601 381 aaKnown RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 HIST3H3Q16695 136 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 MICAQ29983 383 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 GSG1Q2KHT4 349 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 ZNF672Q499Z4 452 aaPredicted RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 C1orf146Q5VVC0 180 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FAM205BPQ63HN1 556 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 C1orf94Q6P1W5 598 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 SLC25A47Q6Q0C1 308 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FAM122BQ7Z309 247 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 MYPOPQ86VE0 399 aaPredicted RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 SKA3Q8IX90 412 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 LRRC18Q8N456 261 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 SLC22A24Q8N4F4 322 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 LINC00471Q8N535 108 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 OR10G2Q8NGC3 310 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FGFBP3Q8TAT2 258 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FBXW5Q969U6 566 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 SLCO4A1Q96BD0 722 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 BOD1Q96IK1 185 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FOXN4Q96NZ1 517 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 ERMAPQ96PL5 475 aaPredicted RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 CCL19Q99731 98 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 ALG12Q9BV10 488 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 IFT27Q9BW83 186 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 DENND2DQ9H6A0 471 aaPredicted RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 EGLN3Q9H6Z9 239 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 RNF121Q9H920 327 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 NOX3Q9HBY0 568 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 NRIP3Q9NQ35 241 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 CISD1Q9NZ45 108 aaKnown RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 MOKQ9UQ07 419 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 MGAT4BQ9UQ53 548 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 RAI1Q7Z5J4 1906 aaPredicted RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 ITPR3Q14573 2671 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 A0A1W2PPL8 197 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 SLC22A23A1A5C7 686 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 CENPBD1B2RD01 187 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 E7EQL1 145 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 SOX14O95416 240 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 RAB36O95755 333 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 IGFBP1P08833 259 aaPredicted RBP8.55□□□□□ -1.04
CALD1-223ENST00000496024 OR8G3PP0DMU2 310 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 NR2C1P13056 603 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 CBR1P16152 277 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 NOS3P29474 1203 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 SDHAP31040 664 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 SLC6A6P31641 620 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 GIPRP48546 466 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 RPS6KA3P51812 740 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 RAB1AP62820 205 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 DBPQ10586 325 aaPredicted RBP8.55□□□□□ -1.04
CALD1-223ENST00000496024 ETFDHQ16134 617 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 RFX4Q33E94 735 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 MESTQ5EB52 335 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 CLEC12AQ5QGZ9 265 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 THEM4Q5T1C6 240 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 SLC35F1Q5T1Q4 408 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 C10orf128Q5T292 105 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 GPR139Q6DWJ6 353 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 ZNF770Q6IQ21 691 aaPredicted RBP8.55□□□□□ -1.04
CALD1-223ENST00000496024 B3GLCTQ6Y288 498 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 DPY19L2P2Q6ZN68 376 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 ZNF620Q6ZNG0 422 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 PTCHD4Q6ZW05 846 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 SLC16A14Q7RTX9 510 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 TMEM179BQ7Z7N9 219 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 HS3ST5Q8IZT8 346 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 GIPC3Q8TF64 312 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 NANOS1Q8WY41 292 aaKnown RBP8.55□□□□□ -1.04
CALD1-223ENST00000496024 NINJ1Q92982 152 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 NMD3Q96D46 503 aaKnown RBP8.55□□□□□ -1.04
CALD1-223ENST00000496024 MS4A3Q96HJ5 214 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 MMADHCQ9H3L0 296 aaPredicted RBP8.55□□□□□ -1.04
CALD1-223ENST00000496024 YY1AP1Q9H869 796 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 TBC1D23Q9NUY8 699 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 B3GNT2Q9NY97 397 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 ZNF224Q9NZL3 707 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 PDP1Q9P0J1 537 aaPredicted RBP8.55□□□□□ -1.04
CALD1-223ENST00000496024 LAMP3Q9UQV4 416 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 UGT2A1Q9Y4X1 527 aa8.55□□□□□ -1.04
CALD1-223ENST00000496024 PRSS37A4D1T9 235 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 SLC16A7O60669 478 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 ENTPD5O75356 428 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 UBL3O95164 117 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 IGKV3-15P01624 115 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 CRYAAP02489 173 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 PRKACGP22612 351 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 CALCRP30988 508 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 ARR3P36575 388 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 CDKN2AP42771 156 aaKnown RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 GUCA1AP43080 201 aaPredicted RBP8.54□□□□□ -1.04
CALD1-223ENST00000496024 CENPAP49450 140 aa8.54□□□□□ -1.04
CALD1-223ENST00000496024 FABP6P51161 128 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms