RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 RANBP3Q9H6Z4 567 aaPredicted RBP7.17□□□□□ -1.26
GARNL3-219ENST00000495172 TCF7L2Q9NQB0 619 aa7.17□□□□□ -1.26
GARNL3-219ENST00000495172 TIMM22Q9Y584 194 aa7.17□□□□□ -1.26
GARNL3-219ENST00000495172 TNPO3Q9Y5L0 923 aaKnown RBP7.17□□□□□ -1.26
GARNL3-219ENST00000495172 GPR45Q9Y5Y3 372 aa7.17□□□□□ -1.26
GARNL3-219ENST00000495172 DMBT1Q9UGM3 2413 aaPredicted RBP7.16□□□□□ -1.26
GARNL3-219ENST00000495172 PHYHO14832 338 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 SYNGR1O43759 233 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 TIMM8AO60220 97 aaPredicted RBP7.16□□□□□ -1.26
GARNL3-219ENST00000495172 PEX14O75381 377 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 HSPA4LO95757 839 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 HPRP00739 348 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 NPTX1Q15818 432 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 MOGQ16653 247 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 ZNF718Q3SXZ3 478 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 NHLRC1Q6VVB1 395 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 TMEM219Q86XT9 240 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 VRK2Q86Y07 508 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 PIK3C3Q8NEB9 887 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 PMM1Q92871 262 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 MS4A14Q96JA4 679 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 ZNF649Q9BS31 505 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 BCL2L14Q9BZR8 327 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 NPFFR1Q9GZQ6 430 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 PIF1Q9H611 641 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 ZMAT4Q9H898 229 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 C20orf141Q9NUB4 165 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 SH3BP4Q9P0V3 963 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 KCNG2Q9UJ96 466 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 ZDHHC8Q9ULC8 765 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 TMCC3Q9ULS5 477 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 RASD1Q9Y272 281 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 PKD1P98161 4303 aa7.16□□□□□ -1.26
GARNL3-219ENST00000495172 PRAMEF27A3QJZ7 478 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 DNALI1O14645 258 aaPredicted RBP7.15□□□□□ -1.26
GARNL3-219ENST00000495172 HDAC3O15379 428 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 SLC25A17O43808 307 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 SSTR1P30872 391 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 STX2P32856 288 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 VEGFCP49767 419 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 ELF3P78545 371 aaPredicted RBP7.15□□□□□ -1.26
GARNL3-219ENST00000495172 PSG7Q13046 419 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 C1DQ13901 141 aaKnown RBP7.15□□□□□ -1.26
GARNL3-219ENST00000495172 TBC1D28Q2M2D7 210 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 PLA1AQ53H76 456 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 ATG16L1Q676U5 607 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 CCDC137Q6PK04 289 aaKnown RBP7.15□□□□□ -1.26
GARNL3-219ENST00000495172 WDR88Q6ZMY6 472 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 ZNF627Q7L945 461 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 MOGAT3Q86VF5 341 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 ARFGAP2Q8N6H7 521 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 OR10AD1Q8NGE0 317 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 RHEBL1Q8TAI7 183 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 PIFOQ8TCI5 191 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 SLC7A13Q8TCU3 470 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 ZNF483Q8TF39 744 aaPredicted RBP7.15□□□□□ -1.26
GARNL3-219ENST00000495172 AJUBAQ96IF1 538 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 TAPBPLQ9BX59 468 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 MMADHCQ9H3L0 296 aaPredicted RBP7.15□□□□□ -1.26
GARNL3-219ENST00000495172 ONECUT1Q9UBC0 465 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 SMAD5-AS1Q9Y6J3 95 aa7.15□□□□□ -1.26
GARNL3-219ENST00000495172 DNAH17Q9UFH2 4485 aa7.15□□□□□ -1.27
GARNL3-219ENST00000495172 LOC100509620A0A075B734 347 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 TRBV23-1A0A0A0MS06 115 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 HMX2A2RU54 273 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 VAMP5O95183 116 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 SNAP29O95721 258 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 OTCP00480 354 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 IGF2P01344 180 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 TPM3P06753 285 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 SNRNP70P08621 437 aaKnown RBP7.14□□□□□ -1.27
GARNL3-219ENST00000495172 RPS17P08708 135 aaKnown RBP7.14□□□□□ -1.27
GARNL3-219ENST00000495172 IFI6P09912 130 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 DUX4L4P0CJ87 422 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 FAHP16930 419 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 CRHR1P34998 444 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 RPS5P46782 204 aaKnown RBP7.14□□□□□ -1.27
GARNL3-219ENST00000495172 RAB13P51153 203 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 BLCAPP62952 87 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 POU4F2Q12837 409 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 PDIA2Q13087 525 aaKnown RBP7.14□□□□□ -1.27
GARNL3-219ENST00000495172 FRG1Q14331 258 aaKnown RBP7.14□□□□□ -1.27
GARNL3-219ENST00000495172 MTX3Q5HYI7 312 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 C1orf140Q5VVS0 124 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 ZCCHC12Q6PEW1 402 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 KCTD18Q6PI47 426 aaPredicted RBP7.14□□□□□ -1.27
GARNL3-219ENST00000495172 BTN2A1Q7KYR7 527 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 LRRC8AQ8IWT6 810 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 Q8N2B8 174 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 SLC22A24Q8N4F4 322 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 ABHD4Q8TB40 342 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 GPR61Q9BZJ8 451 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 ULBP2Q9BZM5 246 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 BAIAP2L1Q9UHR4 511 aa7.14□□□□□ -1.27
GARNL3-219ENST00000495172 TSSC4Q9Y5U2 329 aaPredicted RBP7.14□□□□□ -1.27
GARNL3-219ENST00000495172 DNAH6Q9C0G6 4158 aa7.13□□□□□ -1.27
GARNL3-219ENST00000495172 FTCDNL1E5RQL4 147 aa7.13□□□□□ -1.27
GARNL3-219ENST00000495172 NPIPB8E9PQR5 432 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms