RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ZNF417Q8TAU3 575 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 PELI1Q96FA3 418 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 PGLYRP3Q96LB9 341 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 ZNF587Q96SQ5 575 aaPredicted RBP14.59□□□□□ -0.07
CBX4-204ENST00000495122 MESP1Q9BRJ9 268 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 SP140LQ9H930 580 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 SH2D2AQ9NP31 389 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 SACM1LQ9NTJ5 587 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 FAIMQ9NVQ4 179 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 HDGFL3Q9Y3E1 203 aa14.59□□□□□ -0.07
CBX4-204ENST00000495122 A0A1B0GVG6 124 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 LIPT2A6NK58 231 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 SELENOFO60613 162 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 ZNF432O94892 652 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 TNFSF8P32971 234 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 NAA10P41227 235 aaPredicted RBP14.58□□□□□ -0.08
CBX4-204ENST00000495122 DEFA1P59665 94 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 DEFA3P59666 94 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 OXA1LQ15070 435 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 TRIM16LQ309B1 348 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 GLYR1Q49A26 553 aaPredicted RBP14.58□□□□□ -0.08
CBX4-204ENST00000495122 C1QL3Q5VWW1 255 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 H3F3CQ6NXT2 135 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 JMJD6Q6NYC1 403 aaPredicted RBP14.58□□□□□ -0.08
CBX4-204ENST00000495122 PPP1R32Q7Z5V6 425 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 PLCZ1Q86YW0 608 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 CENPSQ8N2Z9 138 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 ZNF454Q8N9F8 522 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 ABHD4Q8TB40 342 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 SETD6Q8TBK2 473 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 ZPLD1Q8TCW7 415 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 IP6K3Q96PC2 410 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 INTS14Q96SY0 518 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 SMAD5Q99717 465 aaKnown RBP14.58□□□□□ -0.08
CBX4-204ENST00000495122 KCNS3Q9BQ31 491 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 TTYH2Q9BSA4 534 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 HDHD5Q9BXW7 423 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 CNTRLQ7Z7A1 2325 aa14.58□□□□□ -0.08
CBX4-204ENST00000495122 LOC102725191A0A1B0GVB3 256 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 A6NL46 340 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 TTLL8A6PVC2 850 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 SNPHO15079 494 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 ARHGEF9O43307 516 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 GMFGO60234 142 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 SLC19A2O60779 497 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 KRT8P05787 483 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 OCM2P0CE71 109 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 OCMP0CE72 109 aaPredicted RBP14.57□□□□□ -0.08
CBX4-204ENST00000495122 ZNF17P17021 662 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 GDI2P50395 445 aaKnown RBP14.57□□□□□ -0.08
CBX4-204ENST00000495122 HBMQ6B0K9 141 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 ARSKQ6UWY0 536 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 SSX6Q7RTT6 188 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 OR6V1Q8N148 313 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 GTPBP8Q8N3Z3 284 aaPredicted RBP14.57□□□□□ -0.08
CBX4-204ENST00000495122 RBMXL3Q8N7X1 1067 aaKnown RBP14.57□□□□□ -0.08
CBX4-204ENST00000495122 Q8NA96 180 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 CPT1CQ8TCG5 803 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 TMEM41AQ96HV5 264 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 OR11A1Q9GZK7 315 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 DAPK2Q9UIK4 370 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 GNG8Q9UK08 70 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 B9D1Q9UPM9 204 aa14.57□□□□□ -0.08
CBX4-204ENST00000495122 RPH3AQ9Y2J0 694 aaPredicted RBP14.57□□□□□ -0.08
CBX4-204ENST00000495122 SIRT4Q9Y6E7 314 aaPredicted RBP14.57□□□□□ -0.08
CBX4-204ENST00000495122 SLC22A23A1A5C7 686 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 C17orf51A8MQB3 221 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 ZNF879B4DU55 563 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 NPIPA5E9PKD4 350 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 C11orf98E9PRG8 122 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 CTDSP2O14595 271 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 RGS5O15539 181 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 SERPINI2O75830 405 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 PTTG1O95997 202 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 SERPINA7P05543 415 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 NR2C1P13056 603 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 AHCYP23526 432 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 UQCRFS1P47985 274 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 DSCR4P56555 118 aaPredicted RBP14.56□□□□□ -0.08
CBX4-204ENST00000495122 MXD1Q05195 221 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 C11orf91Q3C1V1 193 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 TP53I3Q53FA7 332 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 YIF1BQ5BJH7 314 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 SLC22A10Q63ZE4 541 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 ZNF544Q6NX49 715 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 XKRXQ6PP77 449 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 LYSMD2Q8IV50 215 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 TMEM156Q8N614 296 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 GDPD1Q8N9F7 314 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 GALNT11Q8NCW6 608 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 OR51L1Q8NGJ5 315 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 POC1BQ8TC44 478 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 ASB10Q8WXI3 467 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 GHSRQ92847 366 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.56□□□□□ -0.085e-7■■□□□ 11.9
CBX4-204ENST00000495122 SYT4Q9H2B2 425 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 ZNF160Q9HCG1 818 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 HPF1Q9NWY4 346 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 LAMP5Q9UJQ1 280 aa14.56□□□□□ -0.08
CBX4-204ENST00000495122 NPIPA1Q9UND3 350 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms