RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 HIST1H2ABP04908 130 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 QDPRP09417 244 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 MAKP20794 623 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 CLRN1P58418 232 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 VSNL1P62760 191 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 IL13RA1P78552 427 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 CDK6Q00534 326 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 MELKQ14680 651 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 ZNF718Q3SXZ3 478 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 MIDNQ504T8 468 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 SWT1Q5T5J6 900 aaKnown RBP12.1□□□□□ -0.47
VARS-228ENST00000495010 LRFN4Q6PJG9 635 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 SLC2A7Q6PXP3 512 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 UNQ6126/PRO20091Q6UXV3 157 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 HIST3H2AQ7L7L0 130 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 LRRC17Q8N6Y2 441 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 GTF3AQ92664 365 aaKnown RBP12.1□□□□□ -0.47
VARS-228ENST00000495010 GTF2H4Q92759 462 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 DVL3Q92997 716 aaPredicted RBP12.1□□□□□ -0.47
VARS-228ENST00000495010 HIST1H2ACQ93077 130 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 SLC25A44Q96H78 314 aaPredicted RBP12.1□□□□□ -0.47
VARS-228ENST00000495010 C1QTNF5Q9BXJ0 243 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 PAIP1Q9H074 479 aaKnown RBP12.1□□□□□ -0.47
VARS-228ENST00000495010 EVA1AQ9H8M9 152 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 TCF7L2Q9NQB0 619 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 SDR39U1Q9NRG7 319 aaPredicted RBP12.1□□□□□ -0.47
VARS-228ENST00000495010 THAP1Q9NVV9 213 aa12.1□□□□□ -0.47
VARS-228ENST00000495010 EIF3KQ9UBQ5 218 aaKnown RBP12.1□□□□□ -0.47
VARS-228ENST00000495010 DNAJC9-AS1A6NH13 148 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 POM121CA8CG34 1229 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
VARS-228ENST00000495010 IGHV1-46P01743 117 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 SLC6A2P23975 617 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 DOK3Q7L591 496 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 COMTD1Q86VU5 262 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 LRRC18Q8N456 261 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 HIPK4Q8NE63 616 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 OR9I1Q8NGQ6 314 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 LRRC58Q96CX6 371 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
VARS-228ENST00000495010 MCHR1Q99705 422 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 MRI1Q9BV20 369 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 CCNB1IP1Q9NPC3 277 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 NANSQ9NR45 359 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 AUP1Q9Y679 476 aa12.09□□□□□ -0.47
VARS-228ENST00000495010 WNK2Q9Y3S1 2297 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 PPIAL4EA0A075B759 164 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 PPIAL4CA0A0B4J2A2 164 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 PPIAL4DF5H284 164 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 MFN2O95140 757 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 CH25HO95992 272 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 IGHG1P01857 330 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 VIMP08670 466 aaKnown RBP12.08□□□□□ -0.48
VARS-228ENST00000495010 PGA4P0DJD7 388 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 PGA3P0DJD8 388 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 PPIAL4FP0DN26 164 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 UMPSP11172 480 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 PPIBP23284 216 aaKnown RBP12.08□□□□□ -0.48
VARS-228ENST00000495010 LIPAP38571 399 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 SCARB2Q14108 478 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 NRN1LQ496H8 165 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 SPATA46Q5T0L3 261 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 TTC33Q6PID6 262 aaPredicted RBP12.08□□□□□ -0.48
VARS-228ENST00000495010 ARMC8Q8IUR7 673 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 AENQ8WTP8 325 aaKnown RBP12.08□□□□□ -0.48
VARS-228ENST00000495010 PLEK2Q9NYT0 353 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 TAS2R5Q9NYW4 299 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 ZNF69Q9UC07 566 aa12.08□□□□□ -0.48
VARS-228ENST00000495010 LEF1Q9UJU2 399 aaPredicted RBP12.08□□□□□ -0.48
VARS-228ENST00000495010 PURGQ9UJV8 347 aaKnown RBP12.08□□□□□ -0.48
VARS-228ENST00000495010 MCIDASD6RGH6 385 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 CHP2O43745 196 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 MGRN1O60291 552 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 SBK2P0C263 348 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 ZFP36P26651 326 aaKnown RBP12.07□□□□□ -0.48
VARS-228ENST00000495010 STOMP27105 288 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 AQP1P29972 269 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 STX1BP61266 288 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 MPP2Q14168 576 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 ZNF74Q16587 644 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 THEM4Q5T1C6 240 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 ZNF613Q6PF04 617 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 KLHL36Q8N4N3 616 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 SPICQ8N5J4 248 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 MCHR2Q969V1 340 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 MAELQ96JY0 434 aaKnown RBP12.07□□□□□ -0.48
VARS-228ENST00000495010 DCLRE1CQ96SD1 692 aaKnown RBP12.07□□□□□ -0.48
VARS-228ENST00000495010 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 RSPO3Q9BXY4 272 aaPredicted RBP12.07□□□□□ -0.48
VARS-228ENST00000495010 MS4A7Q9GZW8 240 aaPredicted RBP12.07□□□□□ -0.48
VARS-228ENST00000495010 ZDHHC8Q9ULC8 765 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 TRIM33Q9UPN9 1127 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 CORO2BQ9UQ03 480 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 NPTNQ9Y639 398 aa12.07□□□□□ -0.48
VARS-228ENST00000495010 A0A0G2JK05 382 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 A0A1W2PRG6 482 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 C5orf49A4QMS7 147 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms