RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 SNHG28P0DPA3 235 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CEACAM1P13688 526 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 PNLIPP16233 465 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 HOXB6P17509 224 aaKnown RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 CD33P20138 364 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 PTNP21246 168 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 ADORA2BP29275 332 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CTHP32929 405 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 IGFALSP35858 605 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 DUSP3P51452 185 aaPredicted RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 CRYBA2P53672 197 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 DVL1P1P54792 670 aaPredicted RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 TAS2R41P59536 307 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 RPS14P62263 151 aaKnown RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 EIF5AP63241 154 aaKnown RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 SLC6A3Q01959 620 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 VAMP3Q15836 100 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CPSF6Q16630 551 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATG3-207ENST00000494571 CCSMST1Q4G0I0 132 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 ARMC12Q5T9G4 340 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 PRPF38BQ5VTL8 546 aaKnown RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 YOD1Q5VVQ6 348 aaPredicted RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 EEF1DP3Q658K8 133 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 MPZL3Q6UWV2 235 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 RPTNQ6XPR3 784 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CD163Q86VB7 1156 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 ANGPTL5Q86XS5 388 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 NRMQ8IXM6 262 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CMTM4Q8IZR5 234 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 ARIH2OSQ8N7S6 290 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 ABHD5Q8WTS1 349 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 TSLPQ969D9 159 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 SLC25A38Q96DW6 304 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 SDSLQ96GA7 329 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 C16orf58Q96GQ5 468 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 DERL3Q96Q80 235 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 AARSD1Q9BTE6 412 aaKnown RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 TEX101Q9BY14 249 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 ZNF700Q9H0M5 742 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 POFUT1Q9H488 388 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CLMPQ9H6B4 373 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CWH43Q9H720 699 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 IPPKQ9H8X2 491 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 AGO4Q9HCK5 861 aaKnown RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 MYNNQ9NPC7 610 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 TM7SF3Q9NS93 570 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 ACER3Q9NUN7 267 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CAMK2AQ9UQM7 478 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 KCNK6Q9Y257 313 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 HDGFL3Q9Y3E1 203 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 UBIAD1Q9Y5Z9 338 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 SIRT4Q9Y6E7 314 aaPredicted RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 DOT1LQ8TEK3 1739 aa3.69□□□□□ -1.82
ATG3-207ENST00000494571 CHD3Q12873 2000 aaKnown RBP3.69□□□□□ -1.82
ATG3-207ENST00000494571 TRBV5-3A0A0A0MS03 114 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ARL5CA6NH57 179 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 DVL1O14640 695 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ATXN7O15265 892 aaPredicted RBP3.68□□□□□ -1.82
ATG3-207ENST00000494571 IRAK2O43187 625 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 RDH16O75452 317 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 REM1O75628 298 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 GLSO94925 669 aaPredicted RBP3.68□□□□□ -1.82
ATG3-207ENST00000494571 KLF8O95600 359 aaPredicted RBP3.68□□□□□ -1.82
ATG3-207ENST00000494571 PPBPP02775 128 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ATP1B1P05026 303 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 OR5G3P0C626 314 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 OSMP13725 252 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 HSD11B1P28845 292 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 CD34P28906 385 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 SLC11A1P49279 550 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 CCR5P51681 352 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ELLP55199 621 aaPredicted RBP3.68□□□□□ -1.82
ATG3-207ENST00000494571 ERVFRD-1P60508 538 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 SNRPGP62308 76 aaKnown RBP3.68□□□□□ -1.82
ATG3-207ENST00000494571 CLDN10P78369 228 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 CRMP1Q14194 572 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 EBPQ15125 230 aaKnown RBP3.68□□□□□ -1.82
ATG3-207ENST00000494571 MMDQ15546 238 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 AMHR2Q16671 573 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 IQCJQ1A5X6 159 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 TRIM61Q5EBN2 209 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 TMEM69Q5SWH9 247 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 TPTE2P1Q5T6R2 138 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 AADACL3Q5VUY0 350 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 SHISA2Q6UWI4 295 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ENPP7Q6UWV6 458 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ALKAL1Q6UXT8 129 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ANKRD33Q7Z3H0 272 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 ACOT1Q86TX2 421 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 RTN4RL1Q86UN2 441 aaPredicted RBP3.68□□□□□ -1.82
ATG3-207ENST00000494571 C1QL4Q86Z23 238 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 NPAS4Q8IUM7 802 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 RGL4Q8IZJ4 473 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 LINC00471Q8N535 108 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 LRRC52Q8N7C0 313 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 PLPP5Q8NEB5 264 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 OR10H4Q8NGA5 316 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 OR51G2Q8NGK0 314 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 OR4C15Q8NGM1 316 aa3.68□□□□□ -1.82
ATG3-207ENST00000494571 FAM216AQ8WUB2 273 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms