RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 RSPH14Q9UHP6 348 aa5.71□□□□□ -1.5
SNX13-210ENST00000494402 TFR2Q9UP52 801 aa5.71□□□□□ -1.5
SNX13-210ENST00000494402 NTNG1Q9Y2I2 539 aa5.71□□□□□ -1.5
SNX13-210ENST00000494402 ADGRL3Q9HAR2 1447 aa5.71□□□□□ -1.5
SNX13-210ENST00000494402 NCANO14594 1321 aa5.71□□□□□ -1.5
SNX13-210ENST00000494402 CNTNAP1P78357 1384 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 IGLV5-52A0A0A0MRZ9 124 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 A0A1B0GU03 582 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 IQCMA0A1B0GVH7 501 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 A0A1B0GW55 424 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 USP27XA6NNY8 438 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 EFCAB7A8K855 629 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 LYRM9A8MSI8 78 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 RNF212BA8MTL3 300 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 INAFM1C9JVW0 142 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 H0Y980 276 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 NUDT14O95848 222 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4L2P0CJ85 424 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4L3P0CJ86 424 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4L4P0CJ87 422 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4L5P0CJ88 424 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4L6P0CJ89 424 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4L7P0CJ90 424 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 GFAPP14136 432 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 CSNK2A2P19784 350 aaPredicted RBP5.7□□□□□ -1.5
SNX13-210ENST00000494402 RAB4AP20338 218 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 ATP4BP51164 291 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 HILS1P60008 231 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 ERVS71-1P61550 626 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 STXBP1P61764 594 aaKnown RBP5.7□□□□□ -1.5
SNX13-210ENST00000494402 CCL7P80098 99 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 S100A12P80511 92 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 TFF2Q03403 129 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 POU2AF1Q16633 256 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 RFX4Q33E94 735 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 FRMPD2BQ6IN97 320 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4L9Q6RFH8 374 aaPredicted RBP5.7□□□□□ -1.5
SNX13-210ENST00000494402 METTL7BQ6UX53 244 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DRAM2Q6UX65 266 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 ZFP82Q8N141 532 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 LRRC52Q8N7C0 313 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 ZNF114Q8NC26 417 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 OR4K2Q8NGD2 314 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 OR9A4Q8NGU2 314 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 ACTL9Q8TC94 416 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 PCNPQ8WW12 178 aaKnown RBP5.7□□□□□ -1.5
SNX13-210ENST00000494402 DNASE2BQ8WZ79 361 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 HGDQ93099 445 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 ZNF385AQ96PM9 386 aaKnown RBP5.7□□□□□ -1.5
SNX13-210ENST00000494402 ALKBH3Q96Q83 286 aaPredicted RBP5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUSP26Q9BV47 211 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 PITPNM3Q9BZ71 974 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 UBE2ZQ9H832 354 aaPredicted RBP5.7□□□□□ -1.5
SNX13-210ENST00000494402 NT5DC2Q9H857 520 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 FGFR1OP2Q9NVK5 253 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 EHFQ9NZC4 300 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 DUX4Q9UBX2 424 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 ELP1O95163 1332 aa5.7□□□□□ -1.5
SNX13-210ENST00000494402 RAB3GAP2Q9H2M9 1393 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 M0QZ92 97 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 MRPS12O15235 138 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 TNFSF12O43508 249 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 GATCO43716 136 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 BCAR3O75815 825 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 FRMD6-AS1P0C7T7 363 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 RFX2P48378 723 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 RPL31P62899 125 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 RPS27AP62979 156 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 FOXF2Q12947 444 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 PDIA2Q13087 525 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 ZNF154Q13106 437 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 UNC119Q13432 240 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 TAB1Q15750 504 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 ZIC1Q15915 447 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 CCDC6Q16204 474 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 CYP51A1Q16850 503 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 FFAR4Q5NUL3 377 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 OGFRL1Q5TC84 451 aaPredicted RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 NIPAL1Q6NVV3 410 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 ZNF549Q6P9A3 640 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 MRPL52Q86TS9 123 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 RBM23Q86U06 439 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 CCNYL1Q8N7R7 359 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 OR2G2Q8NGZ5 317 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 OR4C3Q8NH37 302 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 GATAD1Q8WUU5 269 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 PTH2Q96A98 100 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 SGTBQ96EQ0 304 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 MBOAT7Q96N66 472 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 SORCS2Q96PQ0 1159 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 MRPS26Q9BYN8 205 aaKnown RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 GAREM1Q9H706 876 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 PLGRKTQ9HBL7 147 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 ADGRL4Q9HBW9 690 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 MEPEQ9NQ76 525 aaPredicted RBP5.69□□□□□ -1.5
SNX13-210ENST00000494402 SLC25A37Q9NYZ2 338 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 MUTYHQ9UIF7 546 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 FRMPD3Q5JV73 1810 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 COL4A3Q01955 1670 aa5.69□□□□□ -1.5
SNX13-210ENST00000494402 FHAD1B1AJZ9 1412 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms