RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 B4GALT7Q9UBV7 327 aa3.47□□□□□ -1.85
GTF3A-208ENST00000493903 LSM7Q9UK45 103 aaKnown RBP3.47□□□□□ -1.85
GTF3A-208ENST00000493903 GMEB1Q9Y692 573 aa3.47□□□□□ -1.85
GTF3A-208ENST00000493903 PAPPAQ13219 1627 aa3.47□□□□□ -1.85
GTF3A-208ENST00000493903 KIAA0232Q92628 1395 aa3.47□□□□□ -1.85
GTF3A-208ENST00000493903 ATP7BP35670 1465 aa3.47□□□□□ -1.85
GTF3A-208ENST00000493903 MAP3K19Q56UN5 1328 aa3.46□□□□□ -1.85
GTF3A-208ENST00000493903 TOPAZ1Q8N9V7 1692 aa3.46□□□□□ -1.85
GTF3A-208ENST00000493903 TRAV6A0A075B6T7 132 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 CDC7O00311 574 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 SAP18O00422 153 aaKnown RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 MRPS12O15235 138 aaKnown RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 MGRN1O60291 552 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 SH3BGRLO75368 114 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 FCN3O75636 299 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 VDAC1P21796 283 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 FASP25445 335 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 RORAP35398 523 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 UGT1A3P35503 534 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 SLC1A2P43004 574 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 KIR2DS4P43632 304 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 ARRB1P49407 418 aaPredicted RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 YWHAEP62258 255 aaKnown RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 PAX8Q06710 450 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 CD300CQ08708 224 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 CD47Q08722 323 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 CDH17Q12864 832 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 SERTAD2Q14140 314 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 MARCH8Q5T0T0 291 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 ULK3Q6PHR2 472 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 C2orf66Q6UXQ4 117 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 TMEM135Q86UB9 458 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 NR2C2APQ86WQ0 139 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 SLC39A11Q8N1S5 342 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 CADM2Q8N3J6 435 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 ASCC1Q8N9N2 400 aaKnown RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 INO80EQ8NBZ0 244 aaPredicted RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 TMEM104Q8NE00 496 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 OR52E5Q8NH55 327 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 LYPD6BQ8NI32 183 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 FGF11Q92914 225 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 FGGYQ96C11 551 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 CMTM7Q96FZ5 175 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 PGLYRP4Q96LB8 373 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 OR5M11Q96RB7 305 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 RNF126Q9BV68 326 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 ZYG11BQ9C0D3 744 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 MRPL47Q9HD33 250 aaKnown RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 SAMSN1Q9NSI8 373 aaKnown RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 ARMCX1Q9P291 453 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 ABCD2Q9UBJ2 740 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 SHANK3Q9BYB0 1731 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 WNK3Q9BYP7 1800 aa3.46□□□□□ -1.86
GTF3A-208ENST00000493903 GOLGB1Q14789 3259 aaKnown RBP3.46□□□□□ -1.86
GTF3A-208ENST00000493903 OVOS2A0A0G2JMS6 1433 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 OVOS2A0A0J9YW53 1432 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 OVOS2Q6IE36 1432 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 SBF2Q86WG5 1849 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 TDRD15B5MCY1 1934 aaKnown RBP3.45□□□□□ -1.86
GTF3A-208ENST00000493903 IGHV1OR15-1A0A075B7D0 117 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 IGKV1D-8A0A087WSZ0 117 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 TRAV9-2A0A087WT02 112 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 ZNF99A8MXY4 864 aaPredicted RBP3.45□□□□□ -1.86
GTF3A-208ENST00000493903 MBTPS2O43462 519 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 EEDO75530 441 aaKnown RBP3.45□□□□□ -1.86
GTF3A-208ENST00000493903 CLPXO76031 633 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 FGGP02679 453 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 SLC2A5P22732 501 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 CMA1P23946 247 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 GSSP48637 474 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 UGT2B15P54855 530 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 XIAPP98170 497 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 PAX2Q02962 417 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 SLAQ13239 276 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 CYTH1Q15438 398 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 PRR4Q16378 134 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 AANATQ16613 207 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 LRRC36Q1X8D7 754 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 SOHLH1Q5JUK2 328 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 VAX1Q5SQQ9 334 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 USP43Q70EL4 1123 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 BHLHA9Q7RTU4 235 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 CMTM1Q8IZ96 169 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 RDH10Q8IZV5 341 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 PDIK1LQ8N165 341 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 TCAIMQ8N3R3 496 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 EID2Q8N6I1 236 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 OR2G2Q8NGZ5 317 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 LRRC20Q8TCA0 184 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 CD300LFQ8TDQ1 290 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 CXorf40AQ8TE69 158 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 SMARCD2Q92925 531 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 TMEM246Q9BRR3 403 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 TM6SF2Q9BZW4 377 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 UCK2Q9BZX2 261 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 ACTR3CQ9C0K3 210 aaPredicted RBP3.45□□□□□ -1.86
GTF3A-208ENST00000493903 CWH43Q9H720 699 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 ISG20L2Q9H9L3 353 aaKnown RBP3.45□□□□□ -1.86
GTF3A-208ENST00000493903 ZC4H2Q9NQZ6 224 aa3.45□□□□□ -1.86
GTF3A-208ENST00000493903 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms