RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 GMPR2Q9P2T1 348 aaKnown RBP7.27□□□□□ -1.25
BRCA1-221ENST00000493795 B3GALT5Q9Y2C3 310 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 ARNTLO00327 626 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 AQP9O43315 295 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 EIF1BO60739 113 aaKnown RBP7.27□□□□□ -1.25
BRCA1-221ENST00000493795 CER1O95813 267 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 ACSM4P0C7M7 580 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 IL4RP24394 825 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 C21orf33P30042 268 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-221ENST00000493795 SULT1A2P50226 295 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 HBA1P69905 142 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 CSNK1G2P78368 415 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 NCR3LG1Q68D85 454 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 OR5M10Q6IEU7 315 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 OR2T2Q6IF00 324 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 Q6ZSR6 202 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF534Q76KX8 674 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 PPP1R3BQ86XI6 285 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 COMMD1Q8N668 190 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 OR52E1Q8NGJ3 308 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 OR51H1Q8NH63 302 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 FAM3CQ92520 227 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 PHYHIPQ92561 330 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 RASD2Q96D21 266 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 SYT17Q9BSW7 474 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 BCO1Q9HAY6 547 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 ATP13A2Q9NQ11 1180 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 CSAG2Q9Y5P2 127 aa7.27□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF840PA6NDX5 716 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 C5orf52A6NGY3 159 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 EFSO43281 561 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GATCO43716 136 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GRPP07492 148 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 SLC25A6P12236 298 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 COX5AP20674 150 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ELAVL4P26378 380 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 S100A4P26447 101 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 MAOBP27338 520 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 CCR6P51684 374 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 CCR9P51686 369 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 LCN15Q6UWW0 184 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 PIGTQ969N2 578 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 UTP4Q969X6 686 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 PARP12Q9H0J9 701 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 SLC45A1Q9Y2W3 748 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 BCORL1Q5H9F3 1711 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 A0A0B4J203 849 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 HELTA6NFD8 242 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 H7C1C5 153 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 COX7A2P2O60397 106 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GIPP09681 153 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GPR12P47775 334 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ARSDP51689 593 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 AGFG1P52594 562 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 MRPL2Q5T653 305 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 PRR27Q6MZM9 219 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF561Q8N587 486 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ZFP62Q8NB50 900 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 RELL2Q8NC24 303 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 TMEM230Q96A57 120 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 SMIM7Q9BQ49 75 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 WDR61Q9GZS3 305 aaKnown RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 LINC00597Q9H2U6 94 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 HRH3Q9Y5N1 445 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 HSBP1O75506 76 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ATP1B1P05026 303 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 SHC1P29353 583 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 DDOSTP39656 456 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 LYSMD4Q5XG99 296 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 TFAP2EQ6VUC0 442 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF813Q6ZN06 617 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 MBOAT2Q6ZWT7 520 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF687Q8N1G0 1237 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 OR10AD1Q8NGE0 317 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 FIBINQ8TAL6 211 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 NEIL2Q969S2 332 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 CMTM3Q96MX0 182 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 WRAP73Q9P2S5 460 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 CACFD1Q9UGQ2 172 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 G3V2L1 256 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 CNMDO75829 334 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GPR75O95800 540 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 RD3LP0DJH9 198 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GPX3P22352 226 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 PTBP1P26599 531 aaKnown RBP eCLIP7.26□□□□□ -1.251e-7■■■■■ 45.2
BRCA1-221ENST00000493795 MAP2K6P52564 334 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 OR2B8PP59922 312 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GNB2P62879 340 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 NHLH1Q02575 133 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 NHLH2Q02577 135 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 EVX2Q03828 476 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 COL9A2Q14055 689 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 DOC2BQ14184 412 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 OXA1LQ15070 435 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 NXNL2Q5VZ03 156 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 DGAT2L6Q6ZPD8 337 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF595Q8IYB9 648 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 CBARPQ8N350 705 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-221ENST00000493795 GPR150Q8NGU9 434 aa7.26□□□□□ -1.25
BRCA1-221ENST00000493795 DYNC2LI1Q8TCX1 351 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms