RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ZNF570Q96NI8 536 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 IFT27Q9BW83 186 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 TSSK6Q9BXA6 273 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 GABARAPL3Q9BY60 117 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 KLHL13Q9P2N7 655 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 CLCF1Q9UBD9 225 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 NDRG3Q9UGV2 375 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 IL20RAQ9UHF4 553 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 SIGLEC7Q9Y286 467 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 B3GALT5Q9Y2C3 310 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 HIVEP2P31629 2446 aa10.75□□□□□ -0.69
UPF3A-210ENST00000493727 AQP7P3A6NL99 342 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 MCIDASD6RGH6 385 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 H0YJX3 145 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 PLPP3O14495 311 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 CASKO14936 926 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 PLGP00747 810 aaPredicted RBP10.74□□□□□ -0.69
UPF3A-210ENST00000493727 PCYT1AP49585 367 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 AGFG1P52594 562 aaKnown RBP10.74□□□□□ -0.69
UPF3A-210ENST00000493727 CRISP1P54107 249 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 RPS4XP62701 263 aaKnown RBP10.74□□□□□ -0.69
UPF3A-210ENST00000493727 RPL18Q07020 188 aaKnown RBP10.74□□□□□ -0.69
UPF3A-210ENST00000493727 NPRL3Q12980 569 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 PON3Q15166 354 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 DEFB113Q30KQ7 82 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 OR2A2Q6IF42 318 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 FCRLAQ7L513 359 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 UEVLDQ8IX04 471 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 SLC43A2Q8N370 569 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 DHRSXQ8N5I4 330 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 IQCF1Q8N6M8 205 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 OR2T33Q8NG76 320 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 LINC01560Q8TB33 94 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 ROBO4Q8WZ75 1007 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 INTS12Q96CB8 462 aaKnown RBP10.74□□□□□ -0.69
UPF3A-210ENST00000493727 MBOAT4Q96T53 435 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 ADI1Q9BV57 179 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 PRRG3Q9BZD7 231 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 PLA2G12AQ9BZM1 189 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 INIPQ9NRY2 104 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 RASD1Q9Y272 281 aa10.74□□□□□ -0.69
UPF3A-210ENST00000493727 A0A1W2PNV4 684 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 A0A1W2PRG6 482 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 SH3D21A4FU49 640 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 SLC22A20A6NK97 555 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 SMAD9O15198 467 aaKnown RBP10.73□□□□□ -0.69
UPF3A-210ENST00000493727 PTP4A3O75365 173 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 VAMP5O95183 116 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 PPP1R3DO95685 299 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 FCGR2AP12318 317 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF43P17038 809 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 HOXC12P31275 282 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 RPS6KA3P51812 740 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 CTXN1P60606 82 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 POU3F1Q03052 451 aaPredicted RBP10.73□□□□□ -0.69
UPF3A-210ENST00000493727 FOXF2Q12947 444 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 IKZF1Q13422 519 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 PGGHGQ32M88 737 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 TTC23Q5W5X9 447 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 SLC27A4Q6P1M0 643 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 CASP12Q6UXS9 341 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 DPY19L2P2Q6ZN68 376 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 Q71RC1 249 aaPredicted RBP10.73□□□□□ -0.69
UPF3A-210ENST00000493727 LUZP2Q86TE4 346 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 CCDC103Q8IW40 242 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 KDM8Q8N371 416 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 OR8D4Q8NGM9 314 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 C18orf12Q96KH6 178 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF184Q99676 751 aaPredicted RBP10.73□□□□□ -0.69
UPF3A-210ENST00000493727 KATNB1Q9BVA0 655 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 GALNT8Q9NY28 637 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 IL20Q9NYY1 176 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 GMPPBQ9Y5P6 360 aa10.73□□□□□ -0.69
UPF3A-210ENST00000493727 DSCAMO60469 2012 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 LOC100130705A0A1B0GUX0 176 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 ZNF814B7Z6K7 855 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 AKAP8O43823 692 aaKnown RBP10.72□□□□□ -0.69
UPF3A-210ENST00000493727 FZD7O75084 574 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 HRGP04196 525 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 TP53P04637 393 aaPredicted RBP10.72□□□□□ -0.69
UPF3A-210ENST00000493727 CD14P08571 375 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 INHBBP09529 407 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 POLR2IP36954 125 aaKnown RBP10.72□□□□□ -0.69
UPF3A-210ENST00000493727 CAPGP40121 348 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 DAP3P51398 398 aaKnown RBP10.72□□□□□ -0.69
UPF3A-210ENST00000493727 FXYD6P3P58550 94 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 ERVK-25P63136 954 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 RASGEF1BQ0VAM2 473 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 ZP4Q12836 540 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 GINS1Q14691 196 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 PTGES3Q15185 160 aaKnown RBP10.72□□□□□ -0.69
UPF3A-210ENST00000493727 C6orf52Q5T4I8 152 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 TMEM236Q5W0B7 351 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 GTF2IRD2BQ6EKJ0 949 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 GTF2IRD2Q86UP8 949 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 PRIMA1Q86XR5 153 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 OR9K2Q8NGE7 335 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 FNDC9Q8TBE3 224 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
UPF3A-210ENST00000493727 PLEKHA8Q96JA3 519 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms