RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 C1orf174Q8IYL3 243 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 ICA1LQ8NDH6 482 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 OR6X1Q8NH79 312 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 TCP10LQ8TDR4 215 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 PPP1R36Q96LQ0 422 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 SH3GL3Q99963 347 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 RHOXF2Q9BQY4 288 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 RNF121Q9H920 327 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 BCL2L10Q9HD36 194 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 A4GALTQ9NPC4 353 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 OR5V1Q9UGF6 321 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 RYR3Q15413 4870 aa11.99□□□□□ -0.49
PRPF40A-211ENST00000493468 SLC22A31A6NKX4 558 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 H3BSA7 217 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 RFXANKO14593 260 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 DHHO43323 396 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 HOXA3O43365 443 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 MGRN1O60291 552 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 CRYBA1P05813 215 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 SBK2P0C263 348 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 MYZAPP0CAP1 466 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 CPT2P23786 658 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 CD80P33681 288 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 CRATP43155 626 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 BIDP55957 195 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 SEC61A1P61619 476 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 UFM1P61960 85 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 RELBQ01201 579 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 PAX2Q02962 417 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 PLP2Q04941 152 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 ESCO2Q56NI9 601 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 TMEM255AQ5JRV8 349 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 LRFN4Q6PJG9 635 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 UNQ6126/PRO20091Q6UXV3 157 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 SLC16A14Q7RTX9 510 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 LRRC28Q86X40 367 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 TMEM86BQ8N661 226 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 ZNF283Q8N7M2 679 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 ZNF781Q8N8C0 355 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 RBM15BQ8NDT2 890 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 IPCEF1Q8WWN9 437 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 SLC47A1Q96FL8 570 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 MARS2Q96GW9 593 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 MOGAT1Q96PD6 335 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 SLC6A13Q9NSD5 602 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 C1RLQ9NZP8 487 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 EGFL7Q9UHF1 273 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 LRCH1Q9Y2L9 728 aa11.98□□□□□ -0.49
PRPF40A-211ENST00000493468 MT-ATP6P00846 226 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 MMP7P09237 267 aaPredicted RBP11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 ZCCHC18P0CG32 403 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 SELEP16581 610 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 AHCYP23526 432 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 IL12AP29459 219 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 PRKAR1BP31321 381 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 APLNRP35414 380 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 HLXQ14774 488 aaPredicted RBP11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 PDCD1Q15116 288 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 TAF9Q16594 264 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 LRRN1Q6UXK5 716 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 KIRREL3Q8IZU9 778 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 OR4K5Q8NGD3 323 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 BBS10Q8TAM1 723 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 UBLCP1Q8WVY7 318 aaPredicted RBP11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 GEMIN6Q8WXD5 167 aaKnown RBP11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 ZNF566Q969W8 418 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 SLC25A44Q96H78 314 aaPredicted RBP11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 TMEM43Q9BTV4 400 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 TPT1P8Q9HAU6 139 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 NOX4Q9NPH5 578 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 AIG1Q9NVV5 245 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 KLHL21Q9UJP4 597 aa11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.97□□□□□ -0.49
PRPF40A-211ENST00000493468 TRAV40A0A0B4J280 105 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 A0A0B4J2E0 115 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 MDFIC2A0A1B0GVS7 189 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 A0A1B0GX12 115 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 ICMTO60725 284 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 CLPXO76031 633 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 ALDOCP09972 364 aaKnown RBP11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 MPV17P39210 176 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 BPIFB3P59826 476 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 KRTAP10-3P60369 221 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 BTG1P62324 171 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 SWT1Q5T5J6 900 aaKnown RBP11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 FIP1L1Q6UN15 594 aaKnown RBP11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 BTNL3Q6UXE8 466 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 SLC35D2Q76EJ3 337 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 ZNF101Q8IZC7 436 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 EIF1ADQ8N9N8 165 aaKnown RBP11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 BHLHE22Q8NFJ8 381 aaPredicted RBP11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 OR5J2Q8NH18 312 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 KLF14Q8TD94 323 aaPredicted RBP11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 DACT3Q96B18 629 aaPredicted RBP11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 SLC19A3Q9BZV2 496 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 DCAF16Q9NXF7 216 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 SELENONQ9NZV5 590 aa11.96□□□□□ -0.49
PRPF40A-211ENST00000493468 TRIM33Q9UPN9 1127 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms