RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	DCAF16	Q9NXF7	216 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	LEF1	Q9UJU2	399 aa	Predicted RBP	11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	TRRAP	Q9Y4A5	3859 aa		11.61	□□□□□ -0.55
SAMM50-204	ENST00000493161	RNF13	O43567	381 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	MFN2	O95140	757 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	IGHV3-13	P01766	116 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	MMP7	P09237	267 aa	Predicted RBP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	DRD4	P21917	467 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	FPR2	P25090	351 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF81	P51508	661 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	MMP15	P51511	669 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	FOXL1	Q12952	345 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	SCARB2	Q14108	478 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	NPTX1	Q15818	432 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF74	Q16587	644 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	KLF17	Q5JT82	389 aa	Predicted RBP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	PAGE3	Q5JUK9	113 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	CEP85L	Q5SZL2	805 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	LRIF1	Q5T3J3	769 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	SLC16A14	Q7RTX9	510 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	KRT73	Q86Y46	540 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	FUNDC1	Q8IVP5	155 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF101	Q8IZC7	436 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	LRRC18	Q8N456	261 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	MREG	Q8N565	214 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	GOLGA6L1	Q8N7Z2	621 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	SMYD1	Q8NB12	490 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	RBM15B	Q8NDT2	890 aa	Known RBP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	DEFB108B	Q8NET1	73 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	OR1J1	Q8NGS3	322 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	RAB1C	Q92928	201 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	SLC25A44	Q96H78	314 aa	Predicted RBP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF48	Q96MX3	618 aa	Predicted RBP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF347	Q96SE7	839 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	MCHR1	Q99705	422 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	SPATA5L1	Q9BVQ7	753 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	UBAP1	Q9NZ09	502 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	VAPA	Q9P0L0	249 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZNF69	Q9UC07	566 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161		V9GYY5	206 aa	Predicted RBP	11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	WNK2	Q9Y3S1	2297 aa		11.6	□□□□□ -0.55
SAMM50-204	ENST00000493161	ISPD	A4D126	451 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	DNAJC9-AS1	A6NH13	148 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	ZSCAN5B	A6NJL1	495 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	KPNA4	O00629	521 aa	Predicted RBP	11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	UBOX5	O94941	541 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	OR6A2	O95222	327 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	FARS2	O95363	451 aa	Known RBP	11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	CCNO	P22674	350 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	GATA3	P23771	443 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	PRTN3	P24158	256 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	WNT5A	P41221	380 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	HIST3H3	Q16695	136 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	SLC36A2	Q495M3	483 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	THEM4	Q5T1C6	240 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	TREML4	Q6UXN2	200 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	RETREG3	Q86VR2	466 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	RBM45	Q8IUH3	476 aa	Known RBP	11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	ARMC8	Q8IUR7	673 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	OR4D11	Q8NGI4	311 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	MCHR2	Q969V1	340 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	TIMD4	Q96H15	378 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	BCL2L14	Q9BZR8	327 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	UNKL	Q9H9P5	680 aa	Known RBP	11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	NTN4	Q9HB63	628 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	NPHS2	Q9NP85	383 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	TRIM33	Q9UPN9	1127 aa		11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	SOX21	Q9Y651	276 aa	Predicted RBP	11.59	□□□□□ -0.55
SAMM50-204	ENST00000493161	TRBV5-3	A0A0A0MS03	114 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	IQCM	A0A1B0GVH7	501 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	TMEM120B	A0PK00	339 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	CPSF4L	A6NMK7	179 aa	Known RBP	11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	TRAPPC2L	H3BP13	241 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	OPN1SW	P03999	348 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	CDA	P32320	146 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	DUSP7	Q16829	419 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	PABPC1L2A	Q5JQF8	200 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	SWT1	Q5T5J6	900 aa	Known RBP	11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	WDR93	Q6P2C0	686 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF613	Q6PF04	617 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	DOK3	Q7L591	496 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	SYT14	Q8NB59	555 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	GPR32P1	Q8NGA4	272 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	OR6T1	Q8NGN1	323 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	OR1J2	Q8NGS2	313 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	GEMIN6	Q8WXD5	167 aa	Known RBP	11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	ELMOD3	Q96FG2	381 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	MARS2	Q96GW9	593 aa	Known RBP	11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF607	Q96SK3	696 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	ARHGDIG	Q99819	225 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	C1orf198	Q9H425	327 aa		11.58	□□□□□ -0.56
SAMM50-204	ENST00000493161	LOC100509620	A0A075B734	347 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	PRORSD1P	A6NEY8	169 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	CHP2	O43745	196 aa		11.57	□□□□□ -0.56
SAMM50-204	ENST00000493161	F13B	P05160	661 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms