RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PSMD9O00233 223 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 KHDRBS3O75525 346 aaKnown RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 GPANK1O95872 356 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 OPN1LWP04000 364 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 UCHL1P09936 223 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 PTGS2P35354 604 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 BIDP55957 195 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 ALKBH1Q13686 389 aaKnown RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 OXA1LQ15070 435 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 ETFDHQ16134 617 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 TRIM16LQ309B1 348 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 HBMQ6B0K9 141 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 TMEM225Q6GV28 225 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 SNX29P2Q8IUI4 249 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 LYSMD2Q8IV50 215 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 BEST3Q8N1M1 668 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 ADAMTS17Q8TE56 1095 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 KCTD12Q96CX2 325 aaKnown RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 RBP7Q96R05 134 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 TTYH2Q9BSA4 534 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 MIXL1Q9H2W2 232 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 ABCB10Q9NRK6 738 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 MED29Q9NX70 200 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 STMN3Q9NZ72 180 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 KLHL9Q9P2J3 617 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 KLHL13Q9P2N7 655 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 KCNG2Q9UJ96 466 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 IKZF2Q9UKS7 526 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 COA3Q9Y2R0 106 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 PCSK5Q92824 1860 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 OR2M5A3KFT3 312 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 TBX1O43435 398 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 NCR1O76036 304 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 OCM2P0CE71 109 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 OCMP0CE72 109 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 CD82P27701 267 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 SRD5A2P31213 254 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 MMP16P51512 607 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 NANOS3P60323 173 aaKnown RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 RAC1P63000 192 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 ADAM8P78325 824 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 ROM1Q03395 351 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 TEX30Q5JUR7 227 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 THEM4Q5T1C6 240 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 FAM27D1Q5T7N8 215 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 FDX2Q6P4F2 183 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 KCTD18Q6PI47 426 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 DEFB124Q8NES8 71 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 DIRAS2Q96HU8 199 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 OR8B4Q96RC9 309 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 PDCD1LG2Q9BQ51 273 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 MRPL13Q9BYD1 178 aaKnown RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 TBCCD1Q9NVR7 557 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 ANKRD10Q9NXR5 420 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 RASD1Q9Y272 281 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 MRPS18CQ9Y3D5 142 aaKnown RBP12.56□□□□□ -0.4
PTPN7-216ENST00000492977 V9GYH0 126 aa12.56□□□□□ -0.4
PTPN7-216ENST00000492977 GJE1A6NN92 205 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF879B4DU55 563 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF432O94892 652 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 RPP14O95059 124 aaKnown RBP12.55□□□□□ -0.4
PTPN7-216ENST00000492977 ZFPL1O95159 310 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 HRGP04196 525 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF823P16415 610 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 CNR1P21554 472 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 DNASE1L1P49184 302 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 H3F3AP84243 136 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 TCF15Q12870 199 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 SLC17A1Q14916 467 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 PCK2Q16822 640 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 STEAP3Q658P3 488 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 XKRXQ6PP77 449 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 METAP1DQ6UB28 335 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-216ENST00000492977 NR2C2APQ86WQ0 139 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF679Q8IYX0 411 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 SLC26A10Q8NG04 563 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 OR13C5Q8NGS8 318 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 OR6X1Q8NH79 312 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 OR5AK2Q8NH90 309 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 NSMAFQ92636 917 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 NKD1Q969G9 470 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 KIAA1143Q96AT1 154 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-216ENST00000492977 SLC25A44Q96H78 314 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-216ENST00000492977 MAP6Q96JE9 813 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 SDHCQ99643 169 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-216ENST00000492977 FAIMQ9NVQ4 179 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 SLCO1C1Q9NYB5 712 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 FRRS1LQ9P0K9 344 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 ABI3Q9P2A4 366 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 COMMD3Q9UBI1 195 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 ADAM30Q9UKF2 790 aa12.55□□□□□ -0.4
PTPN7-216ENST00000492977 MRPS18BQ9Y676 258 aaKnown RBP12.55□□□□□ -0.4
PTPN7-216ENST00000492977 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 hCG_2014768A0A024R1R8 64 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 ARPC4-TTLL3A0A0A6YYG9 625 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms