RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ALG10BQ5I7T1 473 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 RPS26P11Q5JNZ5 115 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-212ENST00000492407 VHLLQ6RSH7 139 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 PIWIL3Q7Z3Z3 882 aaKnown RBP7.88□□□□□ -1.15
HDAC3-212ENST00000492407 DPPA2Q7Z7J5 298 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 MDP1Q86V88 176 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 KDM8Q8N371 416 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 SVOPLQ8N434 492 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF417Q8TAU3 575 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 VPS33AQ96AX1 596 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF607Q96SK3 696 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF587Q96SQ5 575 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM43Q9BTV4 400 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 ASPNQ9BXN1 380 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM38AQ9H6F2 299 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM27Q9HBJ8 222 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 NEK6Q9HC98 313 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 MRPL39Q9NYK5 338 aaKnown RBP7.88□□□□□ -1.15
HDAC3-212ENST00000492407 NKIRAS1Q9NYS0 192 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 ALPK2Q86TB3 2170 aa7.88□□□□□ -1.15
HDAC3-212ENST00000492407 SVEP1Q4LDE5 3571 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 IGKV1D-42A0A075B6H8 117 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 A0A0B4J2E0 115 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 A0A1B0GX12 115 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 UBL3O95164 117 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 IFNA14P01570 189 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 TFP02787 698 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 IGFBP1P08833 259 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-212ENST00000492407 CELA3BP08861 270 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ADRA2AP08913 450 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 NUDT7P0C024 238 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ARAFP10398 606 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 KITP10721 976 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF14P17017 642 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-212ENST00000492407 GPX2P18283 190 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ACHEP22303 614 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 GDI2P50395 445 aaKnown RBP7.87□□□□□ -1.15
HDAC3-212ENST00000492407 STX1BP61266 288 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 CDK6Q00534 326 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 PUDPQ08623 228 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 SNTB2Q13425 540 aaKnown RBP7.87□□□□□ -1.15
HDAC3-212ENST00000492407 SCARB2Q14108 478 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 TRMT5Q32P41 509 aaKnown RBP7.87□□□□□ -1.15
HDAC3-212ENST00000492407 GFOD2Q3B7J2 385 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 NRN1LQ496H8 165 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 GTDC1Q4AE62 458 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 GCNT6Q5T4J0 391 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 BLOC1S3Q6QNY0 202 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 EPGNQ6UW88 154 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 TEX47Q8TBZ9 253 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 RDH5Q92781 318 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF837Q96EG3 531 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF75AQ96N20 296 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 OR52B2Q96RD2 323 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF385DQ9H6B1 395 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 SEC61A2Q9H9S3 476 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 CD300AQ9UGN4 299 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 GPR160Q9UJ42 338 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF346Q9UL40 294 aaKnown RBP7.87□□□□□ -1.15
HDAC3-212ENST00000492407 POFUT2Q9Y2G5 429 aa7.87□□□□□ -1.15
HDAC3-212ENST00000492407 NBEAL1Q6ZS30 2694 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 YLPM1P49750 1951 aaKnown RBP7.86□□□□□ -1.15
HDAC3-212ENST00000492407 LRP5LA4QPB2 252 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF503-AS2A6NEH8 195 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF726A6NNF4 738 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 EVPLLA8MZ36 301 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 M0R233 179 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 M0R3G1 203 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 GPR37O15354 613 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 RAB36O95755 333 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 BGLAPP02818 100 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 NQO1P15559 274 aaKnown RBP7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SLC6A2P23975 617 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 HTR2AP28223 471 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SRP14P37108 136 aaKnown RBP7.86□□□□□ -1.15
HDAC3-212ENST00000492407 CAPZA2P47755 286 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SELENOVP59797 346 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 NCALDP61601 193 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 RAB1AP62820 205 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 HOXC5Q00444 222 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 GALK2Q01415 458 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 RBBP4Q09028 425 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ZP4Q12836 540 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 NPRL3Q12980 569 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 PMS2P3Q13401 168 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 COTL1Q14019 142 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 OR1Q1Q15612 314 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 CLVS2Q5SYC1 327 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF613Q6PF04 617 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 LINC00114Q6XXX2 140 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF813Q6ZN06 617 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 MAVSQ7Z434 540 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 MYPOPQ86VE0 399 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-212ENST00000492407 GLCCI1Q86VQ1 547 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 RANBP3LQ86VV4 465 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-212ENST00000492407 MEX3DQ86XN8 651 aaKnown RBP7.86□□□□□ -1.15
HDAC3-212ENST00000492407 CDK20Q8IZL9 346 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF680Q8NEM1 530 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 OR9I1Q8NGQ6 314 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 OR6N1Q8NGY5 312 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms