RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 ZNF26P17031 533 aaPredicted RBP21.34■■□□□ 1.01
UPF3A-209ENST00000492270 RHCEP18577 417 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 SLC9A3P48764 834 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF84P51523 738 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF133P52736 654 aaPredicted RBP21.34■■□□□ 1.01
UPF3A-209ENST00000492270 RPL27P61353 136 aaKnown RBP21.34■■□□□ 1.01
UPF3A-209ENST00000492270 CD47Q08722 323 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 KRT72Q14CN4 511 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 C10orf128Q5T292 105 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 GKAP1Q5VSY0 366 aaPredicted RBP21.34■■□□□ 1.01
UPF3A-209ENST00000492270 TMPRSS11FQ6ZWK6 438 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 PYURFQ96I23 114 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 STX18Q9P2W9 335 aaKnown RBP21.34■■□□□ 1.01
UPF3A-209ENST00000492270 UGT2A1Q9Y4X1 527 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 PMF1-BGLAPU3KQ54 211 aa21.34■■□□□ 1.01
UPF3A-209ENST00000492270 YLPM1P49750 1951 aaKnown RBP21.34■■□□□ 1.01
UPF3A-209ENST00000492270 A0A1W2PRQ8 180 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 PDE5AO76074 875 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 FARS2O95363 451 aaKnown RBP21.33■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF35P13682 527 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 CDAP32320 146 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 SNRPD2P62316 118 aaKnown RBP21.33■■□□□ 1.01
UPF3A-209ENST00000492270 DAG1Q14118 895 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 DGCR6Q14129 220 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 SEC23BQ15437 767 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 RRM2BQ7LG56 351 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 CDK20Q8IZL9 346 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF525Q8N782 197 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 IL17RDQ8NFM7 739 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 OR52J3Q8NH60 311 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF519Q8TB69 540 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 NSMAFQ92636 917 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 NSMCE2Q96MF7 247 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 SORCS2Q96PQ0 1159 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 REG4Q9BYZ8 158 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 DENND2DQ9H6A0 471 aaPredicted RBP21.33■■□□□ 1.01
UPF3A-209ENST00000492270 ZNF442Q9H7R0 627 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 NDE1Q9NXR1 346 aa21.33■■□□□ 1.01
UPF3A-209ENST00000492270 CSPG4Q6UVK1 2322 aa21.33■■□□□ 1
UPF3A-209ENST00000492270 IGHV4-30-2A0A087WSY4 118 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 B9A039 149 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 BMP4P12644 408 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 ERVK-25P63136 954 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 TAF11Q15544 211 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 MSMPQ1L6U9 139 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 ANKDD1AQ495B1 522 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 SLC16A14Q7RTX9 510 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 LRRC18Q8N456 261 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 CCDC197Q8NCU1 140 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 DHRS1Q96LJ7 313 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 PLK3Q9H4B4 646 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 ADAM18Q9Y3Q7 739 aa21.32■■□□□ 1
UPF3A-209ENST00000492270 RTTNQ86VV8 2226 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 FAM171A2A8MVW0 826 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 B2RBV5 119 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 H7C1C5 153 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 GPRIN2O60269 458 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 NPR2P20594 1047 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 NR4A1P22736 598 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 LIMS1P48059 325 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 LCN6P62502 163 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 EFNB3Q15768 340 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 ZBED5Q49AG3 693 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 SLC25A47Q6Q0C1 308 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 SVOPLQ8N434 492 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 NABP1Q96AH0 204 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 NSL1Q96IY1 281 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 FUZQ9BT04 418 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 ALG12Q9BV10 488 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 RNF121Q9H920 327 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 SMURF2Q9HAU4 748 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 TMEM5Q9Y2B1 443 aa21.31■■□□□ 1
UPF3A-209ENST00000492270 FN1P02751 2386 aaKnown RBP21.3■■□□□ 1
UPF3A-209ENST00000492270 SERPINA5P05154 406 aa21.3■■□□□ 1
UPF3A-209ENST00000492270 HOXB4P17483 251 aaPredicted RBP21.3■■□□□ 1
UPF3A-209ENST00000492270 RPL4P36578 427 aaKnown RBP21.3■■□□□ 1
UPF3A-209ENST00000492270 OMPP47874 163 aa21.3■■□□□ 1
UPF3A-209ENST00000492270 EFNA4P52798 201 aa21.3■■□□□ 1
UPF3A-209ENST00000492270 MRPS34P82930 218 aaKnown RBP21.3■■□□□ 1
UPF3A-209ENST00000492270 KRTAP1-1Q07627 177 aa21.3■■□□□ 1
UPF3A-209ENST00000492270 VRK1Q99986 396 aaPredicted RBP21.3■■□□□ 1
UPF3A-209ENST00000492270 FAM53CQ9NYF3 392 aa21.3■■□□□ 1
UPF3A-209ENST00000492270 FBXL3Q9UKT7 428 aa21.3■■□□□ 1
UPF3A-209ENST00000492270 TMEM129A0AVI4 362 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 ENTPD5O75356 428 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 MMP7P09237 267 aaPredicted RBP21.29■■□□□ 1
UPF3A-209ENST00000492270 CCL2P13500 99 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 ATP6V1B2P21281 511 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 MNAT1P51948 309 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 SPIBQ01892 262 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 SLC36A2Q495M3 483 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 NRN1LQ496H8 165 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 TMEM53Q6P2H8 277 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 CLEC2AQ6UVW9 174 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 CYP2R1Q6VVX0 501 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 RINLQ6ZS11 566 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 PAQR4Q8N4S7 273 aaPredicted RBP21.29■■□□□ 1
UPF3A-209ENST00000492270 POM121Q96HA1 1249 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 Q96M85 177 aa21.29■■□□□ 1
UPF3A-209ENST00000492270 RHNO1Q9BSD3 238 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms