RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 A0A0G2JMP0 313 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CENPVL1A0A0U1RR11 272 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 A0A0X1KG70 313 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 OR6C68A6NDL8 312 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 TMEM229AB2RXF0 380 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF878C9JN71 531 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 L7N2F9 121 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 EPXP11678 715 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 PGAM2P15259 253 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 MALLQ13021 153 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CDNFQ49AH0 187 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 FAM198BQ6UWH4 519 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ARMC10Q8N2F6 343 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CCDC54Q8NEL0 328 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 OR4M2Q8NGB6 313 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 KCNE4Q8WWG9 221 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF501Q96CX3 271 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 FOXN4Q96NZ1 517 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 MRPL15Q9P015 296 aaKnown RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 C14orf166Q9Y224 244 aaKnown RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 EMC9Q9Y3B6 208 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 TMEM184BQ9Y519 407 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 R4GMQ9 66 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 FTCDNL1E5RQL4 147 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 PRKNO60260 465 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 MYF5P13349 255 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ENPP1P22413 925 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 LAP3P28838 519 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CCR9P51686 369 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ARPC4P59998 168 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF85Q03923 595 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CHAF1BQ13112 559 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 MRPL49Q13405 166 aaKnown RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CAMK2DQ13557 499 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CD226Q15762 336 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF767PQ75MW2 155 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 TRILQ7L0X0 811 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ABHD12BQ7Z5M8 362 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 BTLAQ7Z6A9 289 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 TMED4Q7Z7H5 227 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 OR52N5Q8NH56 324 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 PELI1Q96FA3 418 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 TSPAN32Q96QS1 320 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 SIGLEC11Q96RL6 698 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CDC6Q99741 560 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 PRRT1Q99946 306 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 OR11A1Q9GZK7 315 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 TGIF2Q9GZN2 237 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 SYNPO2LQ9H987 977 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 NOP16Q9Y3C1 178 aaKnown RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 NUP214P35658 2090 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 KLF4O43474 513 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 RAD1O60671 282 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 PEX14O75381 377 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 RAB3DO95716 219 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 CSN2P05814 226 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 PSMB1P20618 241 aaKnown RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 RRAS2P62070 204 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 EIF5AP63241 154 aaKnown RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 LSM11P83369 360 aaKnown RBP eCLIP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 SCRN3Q0VDG4 424 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 DYRK1AQ13627 763 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 GLYR1Q49A26 553 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF100Q8IYN0 542 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 SLC22A24Q8N4F4 322 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 NPEPL1Q8NDH3 523 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 OR2G2Q8NGZ5 317 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 FAM3DQ96BQ1 224 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 INTS12Q96CB8 462 aaKnown RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 OR8B4Q96RC9 309 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 GPX7Q96SL4 187 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-208ENST00000490993 BEX2Q9BXY8 128 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 NOX3Q9HBY0 568 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 LANCL2Q9NS86 450 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 PARPBPQ9NWS1 579 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 RCE1Q9Y256 329 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 DTX4Q9Y2E6 619 aa6.65□□□□□ -1.34
NPHP3-208ENST00000490993 C2orf72A6NCS6 295 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 ZNF736B4DX44 427 aaPredicted RBP6.65□□□□□ -1.35
NPHP3-208ENST00000490993 MT-ND4P03905 459 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 TCRBP04435 133 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 FBXO45P0C2W1 286 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 TCN2P20062 427 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 FOXF1Q12946 379 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 CNN3Q15417 329 aaKnown RBP6.65□□□□□ -1.35
NPHP3-208ENST00000490993 CBLN3Q6UW01 205 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 PXKQ7Z7A4 578 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 C1orf210Q8IVY1 113 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 SIAH3Q8IW03 269 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 DEDD2Q8WXF8 326 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 NANOS1Q8WY41 292 aaKnown RBP6.65□□□□□ -1.35
NPHP3-208ENST00000490993 FER1L6-AS2Q96M78 137 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 UTP23Q9BRU9 249 aaKnown RBP6.65□□□□□ -1.35
NPHP3-208ENST00000490993 BEX1Q9HBH7 125 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 FANCFQ9NPI8 374 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 PLEK2Q9NYT0 353 aa6.65□□□□□ -1.35
NPHP3-208ENST00000490993 DDAH2O95865 285 aa6.64□□□□□ -1.35
NPHP3-208ENST00000490993 AMY2AP04746 511 aa6.64□□□□□ -1.35
NPHP3-208ENST00000490993 EIF4EP06730 217 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms