RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 FAM157BP0CG42 384 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NAT2P11245 290 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ZNF250P15622 560 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ACADSP16219 412 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CLRN1P58418 232 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TAS2R41P59536 307 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ERVS71-1P61550 626 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RPS23P62266 143 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SF3A3Q12874 501 aaKnown RBP eCLIP16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 LAPTM4AQ15012 233 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 C10orf128Q5T292 105 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NOXO1Q8NFA2 376 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SGTBQ96EQ0 304 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TSPAN32Q96QS1 320 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 FGFR1OP2Q9NVK5 253 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 UGT2A1Q9Y4X1 527 aa16.62■□□□□ 0.25
TNFRSF1B-202ENST00000489921 IGLV3-9A0A075B6K5 115 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 A0A1W2PRG6 482 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CENPBD1B2RD01 187 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 PIP5K1CO60331 668 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RP2O75695 350 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 KDELR2P33947 212 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CYBRD1Q53TN4 286 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SLC16A14Q7RTX9 510 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CPEB3Q8NE35 698 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NABP1Q96AH0 204 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 INIPQ9NRY2 104 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 GMPR2Q9P2T1 348 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 A4GNTQ9UNA3 340 aa16.61■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TENM1Q9UKZ4 2725 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 LOC100653049A0A140TA62 436 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 BBIP1A8MTZ0 92 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 KRT34O76011 436 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 FARS2O95363 451 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SLC2A10O95528 541 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SNAP29O95721 258 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 THRBP10828 461 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ACHEP22303 614 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CDAP32320 146 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MAGEB1P43366 347 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ARFIP2P53365 341 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 FHL1Q13642 323 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CCNIQ14094 377 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ALKBH6Q3KRA9 238 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MMEL1Q495T6 779 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RGS7BPQ6MZT1 257 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TMEM53Q6P2H8 277 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ERICH5Q6P6B1 374 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 DPPA2Q7Z7J5 298 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 LRRC18Q8N456 261 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 CLDND2Q8NHS1 167 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 HDAC2Q92769 488 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RDH5Q92781 318 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RNF121Q9H920 327 aa16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ZNF275Q9NSD4 429 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TMEFF2Q9UIK5 374 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NPIPB13A6NJU9 1138 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 FAM220BPB1ANY3 271 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 NPIPB4C9JG80 1138 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MGRN1O60291 552 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ENTPD5O75356 428 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 HNF1AP20823 631 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 UCP2P55851 309 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 MRPS11P82912 194 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 FMODQ06828 376 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SLC36A2Q495M3 483 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TMEM255AQ5JRV8 349 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SLC25A47Q6Q0C1 308 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 RBM15BQ8NDT2 890 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 C19orf24Q9BVV8 132 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 OR51B6Q9H340 312 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SIAEQ9HAT2 523 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 ARGLU1Q9NWB6 273 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 TAAR3PQ9P1P4 343 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 HIF3AQ9Y2N7 669 aa16.59■□□□□ 0.25
TNFRSF1B-202ENST00000489921 SLC22A23A1A5C7 686 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 FAM157AC9JC47 383 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MCIDASD6RGH6 385 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TROVE2P10155 538 aaKnown RBP eCLIP16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 GPR6P46095 362 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 DAP3P51398 398 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ZNF84P51523 738 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 DVL1P1P54792 670 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TMEM33P57088 247 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SELENOWP63302 87 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MRPS34P82930 218 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 LRRC75AQ8NAA5 344 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ZNF519Q8TB69 540 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SYNPRQ8TBG9 265 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TXNIPQ9H3M7 391 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 C1orf198Q9H425 327 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SMURF2Q9HAU4 748 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CDH20Q9HBT6 801 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MAN2C1Q9NTJ4 1040 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CMTM6Q9NX76 183 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MED31Q9Y3C7 131 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SNX13Q9Y5W8 968 aa16.58■□□□□ 0.24
TNFRSF1B-202ENST00000489921 A0A1W2PPW3 197 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 C17orf100A8MU93 164 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 IFNA14P01570 189 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms