RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 REEP3Q6NUK4 255 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 SLC16A14Q7RTX9 510 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 ZNF546Q86UE3 836 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 LHFPL3Q86UP9 236 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 PUSL1Q8N0Z8 303 aaKnown RBP3.85□□□□□ -1.79
PHF11-215ENST00000488958 ARIH2OSQ8N7S6 290 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 ZNF557Q8N988 423 aaPredicted RBP3.85□□□□□ -1.79
PHF11-215ENST00000488958 HSD17B11Q8NBQ5 300 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 C8orf44Q96CB5 159 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 IQCGQ9H095 443 aaKnown RBP3.85□□□□□ -1.79
PHF11-215ENST00000488958 CYP3A43Q9HB55 503 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 EML4Q9HC35 981 aaKnown RBP3.85□□□□□ -1.79
PHF11-215ENST00000488958 NUFIP1Q9UHK0 495 aaKnown RBP3.85□□□□□ -1.79
PHF11-215ENST00000488958 TP53TG5Q9Y2B4 290 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 PRG3Q9Y2Y8 225 aaPredicted RBP3.85□□□□□ -1.79
PHF11-215ENST00000488958 RHBDD3Q9Y3P4 386 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 SLC25A15Q9Y619 301 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 CNTNAP1P78357 1384 aa3.85□□□□□ -1.79
PHF11-215ENST00000488958 KIF27Q86VH2 1401 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 TRBV9A0A0B4J1U6 114 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 FAM166BA8MTA8 275 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 CLPXO76031 633 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 CRISP2P16562 243 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 UCNP55089 124 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 MECOMQ03112 1051 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 GPNMBQ14956 572 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 C9orf135Q5VTT2 229 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 TTC19Q6DKK2 380 aaPredicted RBP3.84□□□□□ -1.79
PHF11-215ENST00000488958 CERS6Q6ZMG9 384 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 COX15Q7KZN9 410 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 ZNF429Q86V71 674 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 PLA2G4DQ86XP0 818 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 DTX3LQ8TDB6 740 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 CCDC126Q96EE4 140 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 HSFY1Q96LI6 401 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 SDHCQ99643 169 aaPredicted RBP3.84□□□□□ -1.79
PHF11-215ENST00000488958 GBA3Q9H227 469 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 CCL28Q9NRJ3 127 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 LYARQ9NX58 379 aaKnown RBP3.84□□□□□ -1.79
PHF11-215ENST00000488958 CLCF1Q9UBD9 225 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 N6AMT1Q9Y5N5 214 aa3.84□□□□□ -1.79
PHF11-215ENST00000488958 TRBV6-6A0A0A6YYG2 114 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 GABRR3A8MPY1 467 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 C12orf77C9JDV5 145 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 PPP1R2P9O14990 202 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 SRMP19623 302 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 BCKDHBP21953 392 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 RRM2P31350 389 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 RORAP35398 523 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 LHX2P50458 406 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 ACVR1Q04771 509 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 CYTH1Q15438 398 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 TIFABQ6ZNK6 161 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 MMAAQ8IVH4 418 aaKnown RBP3.83□□□□□ -1.8
PHF11-215ENST00000488958 OR2G2Q8NGZ5 317 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 OR6X1Q8NH79 312 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 ACER1Q8TDN7 264 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 ACOT11Q8WXI4 607 aaPredicted RBP3.83□□□□□ -1.8
PHF11-215ENST00000488958 IL22RA2Q969J5 263 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 KIAA1143Q96AT1 154 aaPredicted RBP3.83□□□□□ -1.8
PHF11-215ENST00000488958 PELOQ9BRX2 385 aaKnown RBP3.83□□□□□ -1.8
PHF11-215ENST00000488958 RIOK2Q9BVS4 552 aaKnown RBP3.83□□□□□ -1.8
PHF11-215ENST00000488958 SLC25A39Q9BZJ4 359 aaPredicted RBP3.83□□□□□ -1.8
PHF11-215ENST00000488958 C8orf33Q9H7E9 229 aaPredicted RBP3.83□□□□□ -1.8
PHF11-215ENST00000488958 NACAE9PAV3 2078 aa3.83□□□□□ -1.8
PHF11-215ENST00000488958 FANCIQ9NVI1 1328 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 AKNAQ7Z591 1439 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 PDS5BQ9NTI5 1447 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 LRRIQ3A6PVS8 624 aaPredicted RBP3.82□□□□□ -1.8
PHF11-215ENST00000488958 C12orf71A8MTZ7 269 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 SIRPB1O00241 398 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 MRPS12O15235 138 aaKnown RBP3.82□□□□□ -1.8
PHF11-215ENST00000488958 ERLIN2O94905 339 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 FOLR1P15328 257 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 CPN2P22792 545 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 PPM1LQ5SGD2 360 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 PLCXD3Q63HM9 321 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 ENTHD1Q8IYW4 607 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 IQCKQ8N0W5 287 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 Q8N9L7 120 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 GPX8Q8TED1 209 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 STMN2Q93045 179 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 RNF185Q96GF1 192 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 RARRES2Q99969 163 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 SRMSQ9H3Y6 488 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 TMEM165Q9HC07 324 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 CALYQ9NYX4 217 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 SLC25A37Q9NYZ2 338 aa3.82□□□□□ -1.8
PHF11-215ENST00000488958 MTCL1Q9Y4B5 1905 aaKnown RBP3.81□□□□□ -1.8
PHF11-215ENST00000488958 KCNE1BA0A087WTH5 132 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 IGKV6D-21A0A0A0MT36 114 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 IGKV1D-13A0A0B4J2D9 117 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 KBTBD11-OT1A0A1B0GTJ5 212 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 NKX2-6A6NCS4 301 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 AIM2O14862 343 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 SOX15O60248 233 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 EIF4E2O60573 245 aaKnown RBP3.81□□□□□ -1.8
PHF11-215ENST00000488958 HUS1O60921 280 aa3.81□□□□□ -1.8
PHF11-215ENST00000488958 CLIC3O95833 236 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms