RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CARD18P57730 90 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 PON3Q15166 354 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 STEAP3Q658P3 488 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 STK35Q8TDR2 534 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 KCTD7Q96MP8 289 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 DOCK7Q96N67 2140 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 SLC30A2Q9BRI3 323 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 PTDSS2Q9BVG9 487 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 POTEKPQ9BYX7 375 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 MED12LQ86YW9 2145 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 TRDV1A0A1B0GX56 115 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 SULT2B1O00204 365 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 CTDSP2O14595 271 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 CDRT1O95170 752 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 FUT1P19526 365 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 KLK2P20151 261 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 PTGER4P35408 488 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 CD79BP40259 229 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 RUNX1T1Q06455 604 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 SGCBQ16585 318 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 PDSS1Q5T2R2 415 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 NSUN5P2Q63ZY6 315 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 PLBD1Q6P4A8 553 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 THSD4Q6ZMP0 1018 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 FJX1Q86VR8 437 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 FNDC9Q8TBE3 224 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 CEP19Q96LK0 163 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 UCN2Q96RP3 112 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 DMRTA2Q96SC8 542 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 TMEM43Q9BTV4 400 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 INPP5EQ9NRR6 644 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 SNTG1Q9NSN8 517 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 MEMO1Q9Y316 297 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 CAB39Q9Y376 341 aaPredicted RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 UBR5O95071 2799 aaPredicted RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 E9PLN8 166 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 CCL21O00585 134 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 PMS2P2O95744 297 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 TGM6O95932 706 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 PTTG1O95997 202 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 HOXD4P09016 255 aaPredicted RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 SAGP10523 405 aaPredicted RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 GALP22466 123 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 RPS5P46782 204 aaKnown RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 SLC9A3P48764 834 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 RAC3P60763 192 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 C22orf42Q6IC83 251 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 ZNF322Q6U7Q0 402 aaPredicted RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 CHMP1BQ7LBR1 199 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 LHFPL3Q86UP9 236 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 KISS1RQ969F8 398 aaPredicted RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 TAAR8Q969N4 342 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 VKORC1Q9BQB6 163 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 NEURL2Q9BR09 285 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 TTYH2Q9BSA4 534 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 IFT27Q9BW83 186 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 ENKD1Q9H0I2 346 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 ASB6Q9NWX5 421 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 PAQR5Q9NXK6 330 aaPredicted RBP17.24■□□□□ 0.35
CCM2-216ENST00000488727 GSTK1Q9Y2Q3 226 aa17.24■□□□□ 0.35
CCM2-216ENST00000488727 CCDC182A6NF36 153 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 CD8B2A6NJW9 211 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 LIPT2A6NK58 231 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 SLC22A31A6NKX4 558 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 FTCDNL1E5RQL4 147 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 J3QKU1 62 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 LRRTM2O43300 516 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 TOXO94900 526 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 LALBAP00709 142 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 PAICSP22234 425 aaKnown RBP17.23■□□□□ 0.35
CCM2-216ENST00000488727 TNFSF8P32971 234 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 KRR1Q13601 381 aaKnown RBP17.23■□□□□ 0.35
CCM2-216ENST00000488727 ZNF239Q16600 458 aaKnown RBP17.23■□□□□ 0.35
CCM2-216ENST00000488727 CPNE4Q96A23 557 aaPredicted RBP17.23■□□□□ 0.35
CCM2-216ENST00000488727 CALHM2Q9HA72 323 aa17.23■□□□□ 0.35
CCM2-216ENST00000488727 TRAV36DV7A0A075B6V5 113 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 IGHV3-15A0A0B4J1V0 119 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 SLC22A20A6NK97 555 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 FAM183AA6NL82 134 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 PRR23D1E9PI22 279 aaPredicted RBP17.22■□□□□ 0.35
CCM2-216ENST00000488727 AQP8O94778 261 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 AHSA1O95433 338 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 PRR23D2P0DMB1 279 aaPredicted RBP17.22■□□□□ 0.35
CCM2-216ENST00000488727 GLI4P10075 376 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 ENPP1P22413 925 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 SLC6A6P31641 620 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 CSNK2A1P68400 391 aaPredicted RBP17.22■□□□□ 0.35
CCM2-216ENST00000488727 FABP5Q01469 135 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 GPR50Q13585 617 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 FHL1Q13642 323 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 SF3B4Q15427 424 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCM2-216ENST00000488727 OR7A5Q15622 319 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 C4orf17Q53FE4 359 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 C5orf46Q6UWT4 87 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 TMPRSS11AQ6ZMR5 421 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 ACBD7Q8N6N7 88 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 ARIH2OSQ8N7S6 290 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 C9orf106Q8NAJ2 232 aa17.22■□□□□ 0.35
CCM2-216ENST00000488727 SPRYD4Q8WW59 207 aaPredicted RBP17.22■□□□□ 0.35
CCM2-216ENST00000488727 ROBO4Q8WZ75 1007 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms