RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FAM9BQ8IZU0 186 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 WFDC11Q8NEX6 87 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 CNIH3Q8TBE1 160 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 NRGNQ92686 78 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 RBMXL1Q96E39 390 aaKnown RBP2.82□□□□□ -1.96
ITGB1-214ENST00000488427 HSD3B7Q9H2F3 369 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 SLC25A22Q9H936 323 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 WDR76Q9H967 626 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 LY9Q9HBG7 655 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF302Q9NR11 478 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 KLK12Q9UKR0 248 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 TRPM6Q9BX84 2022 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
ITGB1-214ENST00000488427 A0A1B0GWB2 263 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 TMX2-CTNND1H3BSU7 103 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 PRPSAP2O60256 369 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 SCGB2A1O75556 95 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 B3GAT3O94766 335 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 SLITRK3O94933 977 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 PRB2P02812 416 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-214ENST00000488427 IGHV4-34P06331 123 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 TCN2P20062 427 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 HTR2AP28223 471 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 ADRA1AP35348 466 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 MAGEA5P43359 124 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 HERVK_113P61574 105 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 C16orf72Q14CZ0 275 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 CYB5R2Q6BCY4 276 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 ACSM5Q6NUN0 579 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 UNQ9370/PRO34162Q6UXP9 181 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 EFL1Q7Z2Z2 1120 aaKnown RBP2.81□□□□□ -1.96
ITGB1-214ENST00000488427 IQCKQ8N0W5 287 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 DHRSXQ8N5I4 330 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 ST6GALNAC3Q8NDV1 305 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 NEIL3Q8TAT5 605 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 CCDC110Q8TBZ0 833 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 PNPT1Q8TCS8 783 aaKnown RBP2.81□□□□□ -1.96
ITGB1-214ENST00000488427 KIAA1143Q96AT1 154 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-214ENST00000488427 CYP2S1Q96SQ9 504 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 GABRG3Q99928 467 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 MAGT1Q9H0U3 335 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 LINC00597Q9H2U6 94 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 NXF3Q9H4D5 531 aaKnown RBP2.81□□□□□ -1.96
ITGB1-214ENST00000488427 MMP26Q9NRE1 261 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 NINJ2Q9NZG7 142 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 ASF1AQ9Y294 204 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 U3KQV3 271 aa2.81□□□□□ -1.96
ITGB1-214ENST00000488427 HRNRQ86YZ3 2850 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-214ENST00000488427 CADP27708 2225 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 SCN2AQ99250 2005 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 TRAV19A0A0A6YYK7 116 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 USP27XA6NNY8 438 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 H3BMQ9 156 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 C19orf84I3L1E1 186 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 STX7O15400 261 aaKnown RBP2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CLDN3O15551 220 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 ERLIN2O94905 339 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 H2BFMP0C1H6 154 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CALCBP10092 127 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 POU2F1P14859 743 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 COX7A1P24310 79 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CD80P33681 288 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 LIM2P55344 173 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CSNK1G2P78368 415 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 LRRC63Q05C16 580 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 RIPK1Q13546 671 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CHI3L2Q15782 390 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 GUSBP11Q6P575 273 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CCDC137Q6PK04 289 aaKnown RBP2.8□□□□□ -1.96
ITGB1-214ENST00000488427 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-214ENST00000488427 LHFPL4Q7Z7J7 247 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF619Q8N2I2 560 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 SLC25A45Q8N413 288 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 OR10A7Q8NGE5 316 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 SGMS2Q8NHU3 365 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 SCFD1Q8WVM8 642 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 SELENOMQ8WWX9 145 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 PIGCQ92535 297 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 FAM210BQ96KR6 192 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 MBOAT4Q96T53 435 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 HIST1H4GQ99525 98 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CHRDL1Q9BU40 450 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF331Q9NQX6 463 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-214ENST00000488427 DEC1Q9P2X7 70 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 XPO7Q9UIA9 1087 aaKnown RBP2.8□□□□□ -1.96
ITGB1-214ENST00000488427 ALG6Q9Y672 507 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 CLCA3PQ9Y6N3 262 aa2.8□□□□□ -1.96
ITGB1-214ENST00000488427 PRKDCP78527 4128 aaKnown RBP2.8□□□□□ -1.96
ITGB1-214ENST00000488427 TENM2Q9NT68 2774 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 TLCD2A6NGC4 264 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 A8MUA0 341 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 PANO1I0J062 215 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 K7N7A8 449 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 FCN1O00602 326 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 SLC9A3R1O14745 358 aaPredicted RBP2.79□□□□□ -1.96
ITGB1-214ENST00000488427 MSH4O15457 936 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 TPST2O60704 377 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 DPM1O60762 260 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 OR4F21O95013 312 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 TBXA2RP21731 343 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms